Protein Info for CCNA_01121 in Caulobacter crescentus NA1000 Δfur

Annotation: MA superfamily peptidase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 504 signal peptide" amino acids 1 to 33 (33 residues), see Phobius details PF07607: DUF1570" amino acids 132 to 241 (110 residues), 22.1 bits, see alignment E=2.5e-08

Best Hits

KEGG orthology group: None (inferred from 100% identity to ccs:CCNA_01121)

Predicted SEED Role

"FIG00483664: hypothetical protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A0H3C5N3 at UniProt or InterPro

Protein Sequence (504 amino acids)

>CCNA_01121 MA superfamily peptidase (Caulobacter crescentus NA1000 Δfur)
MDWGFVRSMFVRAVLGLVLSLAILGRPSLARAEWQRAESAHFVVYSDGGESGLRAFTAKL
EDFDALLRLFHGRAPDQDDTARKLDVYLVRSADQLQRVFPDAESAAGVYTAGPNDIFAVA
IRKSTGLADDAVLHEYVHHFMLQHYPGAYPAWLAEGYAEYFMTADIQDKKILVGAPNGAR
VSNLLNGSWVSARDLLTKRPRALTERQGAMYYGQSWLLTHYMLSDPERKKQLSAFVAATA
RGEEPLTAWPKTTGVAVDDLERVMRGYLRSAIPNKTLVRDKQPDFPMVVTTLPASAGDLM
LENQLAKRGPPKDLGQRLLKTVRADAARYPGDRLASLTLARVEADYGDRAAAETMLADWI
AKHPDDAEALRLAGESRLDAAKALKDKPAEAKVLVAEAARFLGRANKAQPDSYQTLYNFA
KTRVGEPGYPSDNTLNVLELSAQLAPQVAEIRLATGEALAARGRYADAVRMLEPVANSPH
GGKAAEAAATLLKTIMERAATPGE