Protein Info for CCNA_01113 in Caulobacter crescentus NA1000 Δfur

Annotation: rhodanese-related sulfurtransferase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 315 PF17773: UPF0176_N" amino acids 4 to 95 (92 residues), 96 bits, see alignment E=1.4e-31 PF00581: Rhodanese" amino acids 116 to 215 (100 residues), 39.1 bits, see alignment E=8.6e-14

Best Hits

Swiss-Prot: 100% identical to Y1060_CAUVC: UPF0176 protein CC_1060 (CC_1060) from Caulobacter vibrioides (strain ATCC 19089 / CB15)

KEGG orthology group: K07146, UPF0176 protein (inferred from 100% identity to ccs:CCNA_01113)

Predicted SEED Role

"Rhodanese domain protein UPF0176, cyanobacterial/alphaproteobacterial subgroup"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See B8H3F9 at UniProt or InterPro

Protein Sequence (315 amino acids)

>CCNA_01113 rhodanese-related sulfurtransferase (Caulobacter crescentus NA1000 Δfur)
MASYRVAALYRFTRFEDPAAIQGPLAALCCSLGVKGTLLLAREGINGTIAGEDAAIEAVL
AHIRALPGCADLTPKTAWAERMPFYRMKVRLKKEIVTLGEPDLDPTDAGTYVEPADWNAL
ISDPDVLVIDTRNAYEVAVGRFEGAIDPQTASFADFPAWFRDWRKSVEAQRGPEAPLKVA
MYCTGGIRCEKSTAFLKAEGVEQVFHLKGGVLDYLEQIPQPESLWRGECFVFDERVSVGH
GLVKGDHVLCRGCRMPVSPQDQASPLYVEGVACPACHDQRNEEQKARAAERHRQVLHCEA
LGVDHVGATLPTKID