Protein Info for CCNA_01050 in Caulobacter crescentus NA1000 Δfur

Annotation: ABC transporter ATP-binding protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 542 PF00005: ABC_tran" amino acids 20 to 190 (171 residues), 83.5 bits, see alignment E=7.9e-27 amino acids 341 to 471 (131 residues), 73.5 bits, see alignment E=9.7e-24 PF12848: ABC_tran_Xtn" amino acids 229 to 312 (84 residues), 78.8 bits, see alignment E=9.6e-26

Best Hits

KEGG orthology group: None (inferred from 100% identity to ccs:CCNA_01050)

Predicted SEED Role

"ATP-binding protein of ABC transporter"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A0H3C5C8 at UniProt or InterPro

Protein Sequence (542 amino acids)

>CCNA_01050 ABC transporter ATP-binding protein (Caulobacter crescentus NA1000 Δfur)
MIRLDNISKQNGHQILFIEASMGVQKGEKVGLVGPNGAGKTTLFRMITGQEQPDDGIVSI
DAGMRIGYFSQDVGEMSGQSAVAAVMDGVGPVSALAAEMATLEAAMVDPDQADQLDAVME
RYGEVLERFQELDGYALEARAREVLAGLSFSQERMDADVGLLSGGWKMRVALARILLMRP
DGMLLDEPSNHLDLESLIWLESFLKNYDGALLMTSHDRAFMNRIIGKVIEIDAGSLITYS
GDLDFYDQQRALSEAQRQAQYERQQAMLAKEIKFIEKFKARASHAAQVQSRVKKLDKIER
VEAPRRRQTVQFEFQSPPRSGEDVISLRGVHKGYGERPIYQDLDFLVRRKERWAVLGANG
AGKSTLLKLVAGDTKPDQGVVNIGASVKMGYFAQHSMDLLDGEETIFESLERSFPQAGQG
ALRTLAGCFGFSGDDVEKPCRVLSGGEKARLVMAKMLFDPPNLLVLDEPTNHLDMVTKEM
LVASLADFEGTMLFVSHDRHFLAALSNRVLELTPEGIHQYGGGYTEYVARTGQEAPGLHP
GG