Protein Info for CCNA_00936 in Caulobacter crescentus NA1000 Δfur

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 279 transmembrane" amino acids 29 to 50 (22 residues), see Phobius details amino acids 83 to 104 (22 residues), see Phobius details amino acids 116 to 135 (20 residues), see Phobius details amino acids 142 to 162 (21 residues), see Phobius details amino acids 182 to 203 (22 residues), see Phobius details amino acids 219 to 238 (20 residues), see Phobius details amino acids 251 to 275 (25 residues), see Phobius details PF10067: DUF2306" amino acids 83 to 219 (137 residues), 68.9 bits, see alignment E=2.9e-23

Best Hits

KEGG orthology group: None (inferred from 100% identity to ccr:CC_0892)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A0H3C6U3 at UniProt or InterPro

Protein Sequence (279 amino acids)

>CCNA_00936 hypothetical protein (Caulobacter crescentus NA1000 Δfur)
MMTMNDPHASPLGEGAARLAAERMLRRAAMAWFCVAAIGQAAFVWMILAHYGRKTLAGDL
AAWNDKPIIKGYVAGDAMGNLQFAVHVLLAVVVTLGGLMQLVPAIRARAPALHRWTGRVF
FVTAFVMALGGLWLTWGRPTYLSLTSAVLVSLNGVLVLALSVQAWRMATARRFDAHRRWA
LRAYLAVNGVWFLRVALMVWAPLTRGWGMDRKLSGPADIALQLCAYVLPLLVLEAYLRAQ
ASANPNAKRAVAGLLIGLTVLTGLGALGAVLILWGPYML