Protein Info for CCNA_00557 in Caulobacter crescentus NA1000 Δfur

Annotation: endonuclease/exonuclease/phosphatase family protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 259 PF23226: Exo_endo_phos_PGAP2IP" amino acids 3 to 178 (176 residues), 28.6 bits, see alignment E=8.7e-11 PF03372: Exo_endo_phos" amino acids 7 to 237 (231 residues), 79.3 bits, see alignment E=3.7e-26

Best Hits

KEGG orthology group: K06896, (no description) (inferred from 100% identity to ccr:CC_0523)

Predicted SEED Role

"probable secreted protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A0H3C408 at UniProt or InterPro

Protein Sequence (259 amino acids)

>CCNA_00557 endonuclease/exonuclease/phosphatase family protein (Caulobacter crescentus NA1000 Δfur)
MKTFRLMTYNVHRCVGTDRKLDVERVAEVIAAERPDVVALQELDVGRARTQSVDQAHRLA
ELLKMSFHFHPAMAVEEELYGDAILTALPERRIKAQGLPLYRRVPGLEPRGALWIEVEVG
GAKVQIINTHLGLVPQEQKRQAAALLGPEWIGEEAWRAPGVLLGDFNATPYSATYRMLRT
ALRDAQAPSPAWLRPATATFPSSFPFMRIDHVFVTKGLETRAVSSPYDARARIASDHLPL
VIDLEITDAGDRAAEAAAR