Protein Info for CCNA_00465 in Caulobacter crescentus NA1000 Δfur

Annotation: UDP-galactopyranose mutase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 370 signal peptide" amino acids 1 to 23 (23 residues), see Phobius details TIGR00031: UDP-galactopyranose mutase" amino acids 8 to 367 (360 residues), 414.2 bits, see alignment E=2.4e-128 PF13450: NAD_binding_8" amino acids 11 to 78 (68 residues), 63.6 bits, see alignment E=1.6e-21 PF03275: GLF" amino acids 154 to 350 (197 residues), 272.4 bits, see alignment E=2.5e-85

Best Hits

KEGG orthology group: K01854, UDP-galactopyranose mutase [EC: 5.4.99.9] (inferred from 100% identity to ccs:CCNA_00465)

Predicted SEED Role

"UDP-galactopyranose mutase (EC 5.4.99.9)" in subsystem LOS core oligosaccharide biosynthesis or linker unit-arabinogalactan synthesis (EC 5.4.99.9)

MetaCyc Pathways

Isozymes

No predicted isozymes

Use Curated BLAST to search for 5.4.99.9

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A0H3C4Q9 at UniProt or InterPro

Protein Sequence (370 amino acids)

>CCNA_00465 UDP-galactopyranose mutase (Caulobacter crescentus NA1000 Δfur)
MGSVEMKDWLIVGAGFAGSVLAERIASQLNQSVLVIDRRPHIGGNAYDELDEAGVLLHRY
GPHIFHTNSKDIFEYLSKFTEWRPYEHRVLAQVRGKLVPIPINRTTLNELYGVSLNSDQE
AQEYLNGVAEPVANIRTSEDVVVNAVGRELYELFFQGYTRKQWGLDPSELDKSVTARVPT
RTNTDDRYFTDEFQAMPKDGYTKMFEKMLDHPNIEVRLGVEWADIKHSNKYNRIIFTGPI
DEYYEFRFGKLPYRSLLFEHKSIHVKEFQSVGTVNYPSPDVPYTRISEYKHLTGQDHSWT
TITYEYPSAEGDPYYPIPRPENQELFKRYEELSLNETNVHFVGRLATYRYYNMDQVVGQA
LAKFRRICPA