Protein Info for CCNA_00162 in Caulobacter crescentus NA1000 Δfur

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 422 signal peptide" amino acids 1 to 24 (24 residues), see Phobius details PF10082: BBP2_2" amino acids 43 to 422 (380 residues), 435.7 bits, see alignment E=7e-135

Best Hits

KEGG orthology group: None (inferred from 100% identity to ccr:CC_0163)

Predicted SEED Role

"Outer membrane protein/protective antigen OMA87"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A0H3C3X1 at UniProt or InterPro

Protein Sequence (422 amino acids)

>CCNA_00162 hypothetical protein (Caulobacter crescentus NA1000 Δfur)
MRILTCSAIAACIAFSAPQLAQAQDLGSSFKRDKNTSVRERPRPDYEAVGQKAGGFTVYP
RVTVDLEHNDNIYAVAAGKTSDEIWRVKPELAVRSDWSRHALGFFAGGNVIRYADNGSED
AEEFTVTANGRVDIERGSNLTGSVQTQRLVEPRTAPTSPVAAGAPVKYDLTSGSATLVKE
FNRLRVTGRVDNRDFNYKDVANIAGTGVVDQDFRDRNELSYGAKAEYAVSPDTAIYATAT
GNKKDYDTNVATQDRSSDGYVIGVGANFDVSEAMRGDVQIGYMKQSYDRAAFKEISGFNA
NANVEWFPTQLTTVGVNASRSIQEAVALGSPGYIANTVGASIDHELMRNVLLSANYSYGK
DAYKGVARDDKRNNFSATATYLLNRRVGLFLTYNYLKQDSSGAQKGASFKDNKLVASVAL
QF