Protein Info for CA264_21625 in Pontibacter actiniarum KMM 6156, DSM 19842

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 541 transmembrane" amino acids 6 to 24 (19 residues), see Phobius details amino acids 309 to 329 (21 residues), see Phobius details amino acids 342 to 362 (21 residues), see Phobius details amino acids 386 to 412 (27 residues), see Phobius details amino acids 424 to 450 (27 residues), see Phobius details amino acids 470 to 494 (25 residues), see Phobius details amino acids 507 to 529 (23 residues), see Phobius details PF14342: DUF4396" amino acids 404 to 537 (134 residues), 51.3 bits, see alignment E=8.1e-18

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1X9YYZ0 at UniProt or InterPro

Protein Sequence (541 amino acids)

>CA264_21625 hypothetical protein (Pontibacter actiniarum KMM 6156, DSM 19842)
MKWTYPIVAFFTVLVIGFGLVNLIKEDLEVAPWAEMGAEEGRLYAHTKNVTRLVSADAAD
LHAYLKTAIPYPEATTADTAPNEENWEKFFQESLKPNPIPKHVVLVPGGSEEALQWALPA
LYYAYFYGSPVAFVNEGRLSGDATRYQHLKAYLIGPEELLPDAAAEGYQAWERITANTPH
RLAVELAKFRDEQAEFGWGRPNDRQNGYFHYVVTTPHDALQGLAALPYARSNNATLLYTE
EDGGLPGVVDSYVWGQRSDWFVSPSEGPFRHFWLVSNRVSYAAQGRLDFAVEKAEYPSMG
PIALGDMEALLLLLVVWGVASAIFVWVHATYTLSMVKMPIKIAWGLSSLLLPILGPALYL
NAYRKPTWKTEKGEWRWLRPHSLQSATATAMGFGYGATLMVAIGFLFVWFGFPIFFPEWM
EGTFFWLGAGMPIMMIAMYVLAVLTAWLLAQYPMKKSMMPDMPDKKVYKMALVTTAVSML
AVSLGMMTGTWYMLMSKIPMMPKEDDVLWFGSIWLASFVGFLIAWPLNWLMIRKKLKPGN
V