Protein Info for CA264_21430 in Pontibacter actiniarum KMM 6156, DSM 19842

Annotation: DDE transposase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 275 transmembrane" amino acids 250 to 267 (18 residues), see Phobius details PF13340: DUF4096" amino acids 22 to 83 (62 residues), 41.1 bits, see alignment E=2.7e-14 PF13359: DDE_Tnp_4" amino acids 113 to 263 (151 residues), 26.3 bits, see alignment E=7.7e-10 PF01609: DDE_Tnp_1" amino acids 131 to 262 (132 residues), 25.3 bits, see alignment E=1.8e-09

Best Hits

KEGG orthology group: None (inferred from 48% identity to zpr:ZPR_3005)

Predicted SEED Role

"Mobile element protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1X9YZB8 at UniProt or InterPro

Protein Sequence (275 amino acids)

>CA264_21430 DDE transposase (Pontibacter actiniarum KMM 6156, DSM 19842)
MEVLSEDSINKWIVPQLSIGKRGPQVHVPVSKLVGAILYKLKTGCQWRLLPVKELLGEGG
LGWQGVYYHFHRWAADGSLRRVWVNLLRQKRRLLNLCSVQLDGSQTLCKNGGECIGFQGR
KAGRTCNSLFLSDDTGTLLACSGPVAGNHHDLFEIKRVFGELADLLQEAGLEVEGLFLNA
DAGFNSEEFRRLCSSLRIEANIAFNFRNGTHEAEYVYFDEQLYKRRNVVEQAQAWLDSFK
ALLIRFETKASNWIALHFLAFTVLFIRKIKKLEKP