Protein Info for CA264_21380 in Pontibacter actiniarum KMM 6156, DSM 19842

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 404 PF01381: HTH_3" amino acids 38 to 88 (51 residues), 30.7 bits, see alignment 2.5e-11 PF13443: HTH_26" amino acids 38 to 89 (52 residues), 25.6 bits, see alignment 1.2e-09

Best Hits

KEGG orthology group: None (inferred from 38% identity to pdi:BDI_0906)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1X9YZA8 at UniProt or InterPro

Protein Sequence (404 amino acids)

>CA264_21380 hypothetical protein (Pontibacter actiniarum KMM 6156, DSM 19842)
MNKQSNSNDGHLLSEIYALLAKDESSCSIIELIENKSKEYNISQRQISEAIGIQRKSLQR
ILEGEAQKIDVLTFLKISQFLGTDLEELVQMYVAGLPVQYIKDVEKARKAGFILRNFDLD
SLKKMGLIESSVDFDHIESRILRRFSLSSIYEYSTEVAAPLFSRTKRNFSDQMVKLWIGS
AYQQFKTINNPNDFEKETLFKIIPRIRAFSRDYDNGLVQVCRALFSIGITVIIQSYLPKI
QVRGATFLVNGKPCIVLSDFNKRYDELWTTLMHELYHVMKDLDLIARMGYHTTKSEGQMV
VDHVSEEKADGFAREFLLPADKRKYIKSFIDVPAMVEGYAEKWNIHPSIIYGLHLEENND
DYPKYRRMILKTNDAIKRFLVYDLEDAPLIEVAEKLKEQVYLNS