Protein Info for CA264_21260 in Pontibacter actiniarum KMM 6156, DSM 19842

Annotation: cation transporter

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1000 1100 1200 1274 signal peptide" amino acids 1 to 31 (31 residues), see Phobius details transmembrane" amino acids 367 to 384 (18 residues), see Phobius details amino acids 391 to 410 (20 residues), see Phobius details amino acids 416 to 437 (22 residues), see Phobius details amino acids 458 to 484 (27 residues), see Phobius details amino acids 503 to 524 (22 residues), see Phobius details amino acids 537 to 562 (26 residues), see Phobius details amino acids 580 to 597 (18 residues), see Phobius details amino acids 609 to 634 (26 residues), see Phobius details amino acids 646 to 665 (20 residues), see Phobius details amino acids 1077 to 1096 (20 residues), see Phobius details amino acids 1102 to 1123 (22 residues), see Phobius details amino acids 1144 to 1164 (21 residues), see Phobius details amino acids 1205 to 1221 (17 residues), see Phobius details amino acids 1233 to 1258 (26 residues), see Phobius details PF00873: ACR_tran" amino acids 5 to 527 (523 residues), 326.6 bits, see alignment E=1.6e-101 amino acids 833 to 1125 (293 residues), 144.3 bits, see alignment E=1.9e-46 amino acids 1144 to 1257 (114 residues), 82.6 bits, see alignment E=8.1e-28

Best Hits

Predicted SEED Role

"Cobalt-zinc-cadmium resistance protein CzcA; Cation efflux system protein CusA"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1X9YYM9 at UniProt or InterPro

Protein Sequence (1274 amino acids)

>CA264_21260 cation transporter (Pontibacter actiniarum KMM 6156, DSM 19842)
MLNRIIRFFLENKLVTALLTVAFIAWGISTAPFNWESDLIPRDPVPVDAIPDIGENQQIV
FTEWMGKSPQDIEDQVTYPLTTALLGVPGVKTVRSSSIFGLSSIYIIFEEDVEFYWSRSR
ILEKLNSLPAGTLPEGVQPALGPDATALGQVYWYTLEGRNPETGEPTGGWDPQELRSIQD
FYLKYSLASAEGVSEVASIGGFVKEYQVDIDPIAMKSHNVNIRDIMQAVGEANMDVGART
IEFNKAEYLIRGLGYVEDINDLEKAVVAVNDNTPIRLRDVARVQLGPAPRRGGLDKGGAE
ATGGVVVARYGSNPLAVINNVKDQIKEIAPGLPSKVLPDGTVSKVTVVPFYDRTNLIYET
LGTLEEALTLEILISVIVVVVLVLNLRASILISSLLPIGVLMTFIVMRYAGVDANIVALS
GIAIAIGVMLDVGVIFTENIIRHLEMPENEGRSKLEVIYEGTIEIASAVLTALATTVISF
IPVFAMTGQEGKLFGPLAFTKTFALLAALFIGIVIIPALAHTLFSLQFGRSKTRRMWSFG
LIAIGILLLFQVPWAGVMLVALGINNLLEPYWPKDKGQYTNYLNIGIVLVGVLYFLTKEW
LPLGAGHSYMTNLLFVAGVIALWLGALLIMVKYYQPILSWCLENKWKFLSIPIGIVLFGV
LAWQGFDKVFGFAATGAEKLGWNLRETGAWVAVSETFPGAGEEFMPPLDEGTFLLMPSTM
PHSGVEENLETIRQLDLLVTAIPEVDVTVGKWGRAATALDPAPISMYENVINYKSEYVRD
QNGYRVAFKVNDKDQYMLKNGEVFDPETMERGELDVSLLIPDPNGEYFRQWRDHIQSPDD
IWEEIVAVSNLPGMTSAPKLQPIATRLIMLSTGMRAPMGLKVFGPDLATIEKVGLQMEDI
LKEVPGVKDASVFADRVVGKPYMELDINRDVIARYGLSIGDVQRVISAAVGGMEMTTTVE
GRERYAVRVRYAREFRDNPEDVKGILVPTPTGAQVPLGQLADVNYVQGPQNIKSEDTYLL
GYVIFDKEEGYAEVDVVENAQALINEKITSGEFEVPVGVSYKFAGNYENQLRAAKTLSIV
IPISLLAIFLLLYFQFGQIQPTLMAFSGVFVAFSGGFILLWLYNQGWFLDFTLFGENMRD
VFQIRPINLSVAVWVGFIALFGVATDDGVLMGTYLKQVFAREETTDKDSIRRAVLIAGSQ
RVRPAVMTTATTIIALLPVLTSTGKGSDIMIPMAIPTFGGMFIQSITMFVVPVLYSMWQE
RKWAGKPKAESLTS