Protein Info for CA264_20930 in Pontibacter actiniarum KMM 6156, DSM 19842

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 203 signal peptide" amino acids 1 to 37 (37 residues), see Phobius details transmembrane" amino acids 47 to 64 (18 residues), see Phobius details amino acids 92 to 113 (22 residues), see Phobius details PF02411: MerT" amino acids 9 to 109 (101 residues), 42.6 bits, see alignment E=6e-15 PF00403: HMA" amino acids 135 to 195 (61 residues), 51.9 bits, see alignment E=8.1e-18

Best Hits

KEGG orthology group: None (inferred from 46% identity to sli:Slin_6742)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1X9YYR6 at UniProt or InterPro

Protein Sequence (203 amino acids)

>CA264_20930 hypothetical protein (Pontibacter actiniarum KMM 6156, DSM 19842)
MRTSPTRLLGTGLLAALLASLCCIAPLLALVGGVTGAISAFGWVEPFRPYLAGITVAVLA
LAWYQRLKAEKSAAACACEGEAKPTFWKSNKFLLAVSCVALLLLAFPEYAGAFYRQQPVA
KAASAQTNFTQSVKLQVKGMTCAGCEAHVNQEVGKLAGVFSVSTSYKKGSAVIKYDSTKV
RPMQILQAARKTGYTVAIEDKKP