Protein Info for CA264_20865 in Pontibacter actiniarum KMM 6156, DSM 19842

Annotation: restriction endonuclease

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 750 800 850 881 PF04851: ResIII" amino acids 1 to 248 (248 residues), 57 bits, see alignment E=1.1e-19

Best Hits

Predicted SEED Role

"FIG00647261: hypothetical protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1X9YYJ8 at UniProt or InterPro

Protein Sequence (881 amino acids)

>CA264_20865 restriction endonuclease (Pontibacter actiniarum KMM 6156, DSM 19842)
MELKTYQQQVIQDLESFLEYTQQHKLVGEAFNRYWEDKIGPYNPLTGQGMRPYKNNVPGA
ASICIKVPTAGGKTFIACNALSTIFRAFPVEKPKAVVWLVPWSNLLDQTVKNLSDPDHPY
RQKLDTLFNHRVEVYKKDDLLQGANFNPTVVQEQLTIIVMSFASLRARRKEDRKVYQENG
QLAQFAQHYKDTSHLLDNTDETALINVIRSLNPVVVVDESHNAESDLSVDMLQALNPSFL
LDLTATPKENSNIISMVPAIELKKEHMVKLPVIVYNHHDKTEVVNSALHLQQNLEQLAKE
QHKNGGRYIRPIVLFQAQPRTGEENTTFDKLKQQLLKLGIPKEQIKIKTANKDELKGVDL
MSEKCPVRFIITINALKEGWDCPFAYILASLADKSSAVDVEQILGRVLRQPYVMKHSHPL
LNVSYVLTASAKFNETLQNIVKGLQASGFSSKDYRHKDALPEAPKPEETPQQSLNKAFFP
EEYPETPNEDEIDTGRISYSLDTPLPPTASSSVISQIEQMAVQQVAETEQRIKEQEKSNT
DNIFSEMGEKVQRYQMRDAFAETAQQIVLPQFFLEVPTSSIFDMETGAALLNQEVLLKGF
RLSDEDTKVAFDSISSDMYKVDLHEAKKDDFTPSFAKIEQQQVKDPIAEYILAKPKESQV
KDIGHQIMQLIGNMYPIAEQEVKIYVERILSKLTTEQLRDFLSRKYSYTDKIKKKIRSLA
DAYAEQRFNEQLKIGKITAAANWKFPVTLVPGALGAPVASSLYEREGSMSNFEQSSIMEF
SSLPNVLFWHRNLVRGKGFAINGFKSNHYPDFILYTKSGRVILLETKGDDRDNSDSEAKC
RLGNQWAQLAGSGYNYFMVFESKAIEGAYNLNKAKELIGQL