Protein Info for CA264_20755 in Pontibacter actiniarum KMM 6156, DSM 19842

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 253 transmembrane" amino acids 14 to 38 (25 residues), see Phobius details amino acids 61 to 84 (24 residues), see Phobius details PF04326: SLFN_AlbA_2" amino acids 109 to 242 (134 residues), 64.5 bits, see alignment E=6.8e-22

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1X9YYF6 at UniProt or InterPro

Protein Sequence (253 amino acids)

>CA264_20755 hypothetical protein (Pontibacter actiniarum KMM 6156, DSM 19842)
MLRLKQIIRSNRQWVWVVSGAVSMLFVLAPILLVLVEYHLGRHRLPLKEVVLNFYNNSLS
IDLVSGLIMMAFLSTGGALGYLLFRSKIAATHDKTNDKIEDLLVKGECATIEFKSSFRWD
YRLLKTSKEIELASLKTIAAFMNSEGGTLLIGVADDTTILGLDKDYQSLKKGDRDGFEQY
IMQSISLYLGTENCKNLKVSFVLTNNNDVCMIQVNSTGTPVFLKHQQHTHFYIRTGNGTR
ELDIQDALKYIKG