Protein Info for CA264_20140 in Pontibacter actiniarum KMM 6156, DSM 19842

Annotation: acriflavin resistance protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1032 transmembrane" amino acids 12 to 30 (19 residues), see Phobius details amino acids 336 to 355 (20 residues), see Phobius details amino acids 362 to 382 (21 residues), see Phobius details amino acids 388 to 412 (25 residues), see Phobius details amino acids 432 to 454 (23 residues), see Phobius details amino acids 460 to 486 (27 residues), see Phobius details amino acids 536 to 555 (20 residues), see Phobius details amino acids 865 to 884 (20 residues), see Phobius details amino acids 892 to 912 (21 residues), see Phobius details amino acids 918 to 941 (24 residues), see Phobius details amino acids 967 to 986 (20 residues), see Phobius details amino acids 995 to 1018 (24 residues), see Phobius details PF00873: ACR_tran" amino acids 4 to 1018 (1015 residues), 635.9 bits, see alignment E=1.8e-194 PF03176: MMPL" amino acids 324 to 495 (172 residues), 25.6 bits, see alignment E=8.5e-10 amino acids 815 to 1017 (203 residues), 38.8 bits, see alignment E=8.3e-14 PF02355: SecD_SecF" amino acids 340 to 482 (143 residues), 26.1 bits, see alignment E=8.1e-10

Best Hits

KEGG orthology group: None (inferred from 73% identity to sli:Slin_2558)

Predicted SEED Role

"Cobalt-zinc-cadmium resistance protein CzcA; Cation efflux system protein CusA"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1X9YXF4 at UniProt or InterPro

Protein Sequence (1032 amino acids)

>CA264_20140 acriflavin resistance protein (Pontibacter actiniarum KMM 6156, DSM 19842)
MNIIKSSLRYPQITLTVLFLVVLVGLNSLLNMPRREDPKITIRAGLVLAFYPGANSAQVE
EQVTNKLEQYLFQFAEVNKEKTFSTTRDGAVVINVELEEWVEEPDVFWSKLRHEMNVAKA
LALPRGVQGPIVNTDFGDTVAMLIGVESDSLSYSQLKEYTRSIEDALRTVEGVSKIKRYG
EQPEQIVVTSQSEKLAQYGLKLPQVVQVLQAQNAISPTGNVKTEGAEVPLYAEGTYTSVQ
EIRNQVVGTSQTGQVIRLGDVANVRRDYAEPTTEISVNGHKALMISVEMQEGNNIVDFGE
TIKAKLAQISRNLPSSVQLTTVVDQPEVVDESISHFIREFFLAIIAVVVVTVLLLPFRIA
AVAAMAIPVTVAVTFALLHTFGIELHQVSLAALIVVLGMVVDDAIVIADNYVELLDEGVE
RWTAAWRSASDLVVPVLTATATIIAAFLPMVILTGSTGEFIFALPVTVTIALASSFVVAM
FLTPYLCYKFIKKGLHEPTQPEQEQLENRKKKVSLLDRMQHVYNRSLDWSMVHRRTVIFG
AIVSVAAAGGMYTLLKQKFFPAAERAQFVVEVWMPTGARLAKTERAVNRIEDVLKQDERV
ADYATFVGTSAPRFYYNFSPEPPVTNFGQILVNTHSNEETEELAAALRRQVDELVPEGRP
RVRLMQQGAPTVTPVEVRIVGHDLGELKRIGNQVQEIIEDAPGSAEVYTNFREDYYGVGL
TLKSEANRLGFTTYDVASSINTGFAGTPVSVLWEGDNPVNIVLRLDEESRQNFNNLENTF
ISSPVTGARVPVRQIANLQPQWQTGRIVHRNGVRTLTVQSEVAPDALASEILKDIQPKIA
ELPLPAGYRIEYGGEIENQKATFSQMVVALGISLVAIFMILLFQFRNLKEALIVMASIPL
SLFGALLGLIITGNPFGFTAFIGLISLSGIVVRNAIILVDYANELIRHGMDIPTAAAEAG
KRRLRPIFLTAMAAAIGVLPMILSGSPLWSPLASVIAVGVVFSMVMALLVVPVLFVVFIK
PQDKQVLAEASH