Protein Info for CA264_20080 in Pontibacter actiniarum KMM 6156, DSM 19842

Annotation: T9SS C-terminal target domain-containing protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 195 signal peptide" amino acids 1 to 23 (23 residues), see Phobius details TIGR04183: Por secretion system C-terminal sorting domain" amino acids 117 to 194 (78 residues), 42.6 bits, see alignment E=2.4e-15 PF18962: Por_Secre_tail" amino acids 118 to 192 (75 residues), 40 bits, see alignment E=2e-14

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1X9YXE7 at UniProt or InterPro

Protein Sequence (195 amino acids)

>CA264_20080 T9SS C-terminal target domain-containing protein (Pontibacter actiniarum KMM 6156, DSM 19842)
MRIFTRIILVTTLIGSHLASFAGDRLAAGTNPTYKGGTTVWKLMPDKVAQLTLSANNARP
NFVEKEDHTCSKIYASAVSQAFHVVEVKQSKSMYANITLAAFAPGSDVKASLPSINAYPN
PSRGRTILALNLPGNDNYKIRISNTIGKVLTVQEIGPAEKAEVKLDLTSLPSGVYFYSLL
VNDKTVETKRLVLQK