Protein Info for CA264_20050 in Pontibacter actiniarum KMM 6156, DSM 19842

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 217 PF02589: LUD_dom" amino acids 112 to 212 (101 residues), 80.2 bits, see alignment E=8.8e-27

Best Hits

KEGG orthology group: K00782, hypothetical protein (inferred from 50% identity to chu:CHU_0614)

Predicted SEED Role

"Predicted L-lactate dehydrogenase, hypothetical protein subunit YkgG" in subsystem Lactate utilization

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1X9YYB3 at UniProt or InterPro

Protein Sequence (217 amino acids)

>CA264_20050 hypothetical protein (Pontibacter actiniarum KMM 6156, DSM 19842)
MYEAKSKEIVLRKVREALAKSAPFLPPTPDFSSPLHPVVPVEDLSVVFAEMFIKNAGVFI
YCDNEEDFFDQLYVYKKEQNLQHLCVWEPNLQNAVHQAGIDFTADEENFVQGTEASLTTC
EALIARTGSVLVSSANAGGRRLSIYPSTHLVVAKASQLVPDIKDGLQRVRNKYKENFPSM
LSMVSGPSRTADIEKTLVMGAHGPKQLVLFLIDDLPH