Protein Info for CA264_19975 in Pontibacter actiniarum KMM 6156, DSM 19842

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1000 1100 1200 1316 PF13195: DUF4011" amino acids 74 to 149 (76 residues), 33.6 bits, see alignment 1.1e-11 PF13604: AAA_30" amino acids 288 to 350 (63 residues), 27.2 bits, see alignment 9.4e-10 PF13086: AAA_11" amino acids 289 to 463 (175 residues), 41.7 bits, see alignment E=3.7e-14 amino acids 928 to 969 (42 residues), 29.9 bits, see alignment (E = 1.4e-10) PF13087: AAA_12" amino acids 993 to 1177 (185 residues), 79 bits, see alignment E=1.1e-25

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1X9YXL9 at UniProt or InterPro

Protein Sequence (1316 amino acids)

>CA264_19975 hypothetical protein (Pontibacter actiniarum KMM 6156, DSM 19842)
MKDILRNYRRRLLNLGSSNRALVLLRLYRELHLDVEAVDFLNGKPAFKVLEQLLSGRKRI
SLSPYADSRHAPVAAVSRRLRFIKRKAEMILEERGSKELYLGWPFVHGSFSDGTAVRCPL
LFFPVRLQVNAAQEWELQPDEVQPPQFNQSFLLAYAHYMGTPLAEDLLELDLSTLPQHPL
EFRTKVYELLKEQQLSINAGREFFAEKLKPFADYKKADYEAALKPGQLHLEQEAVLGIFP
QAASFLLSDYDALLEQDGLQEMEQLFGTPEEHINLNTQAQHTFTAFAMDASQEAALQAVK
QGQSVVVQGPPGTGKSQLICNLVSDFTARGKKVLVVSQKRAALDVVHRRLSQQGLGPFAA
LLHDINADRKAVFAQLREQVEQLDAYKKQNLALNSIYTDRTFLEVSRGINKSLEKLESFK
AALFDAGRSGWSPKELYLRSSLQQPHIPLHSYFKNLTAETVAEFLPRLRQYLQQAIPWQK
EEFVWQERRNMKDYTWQERQELEKVIQALPGEHAALKQHITDLSGYAFGLEELPKYSQSL
ERIQKLQELLEQEGVLQALQPLLQRPTEPKELQTQVLRLKALYLVCPAPDAAIATEDVAA
VKAAVATYEQQQGQLLQRLSWYFSPEKLTLKKALAKYKLTLDEAGVGELQRRLVLRRQAE
ELMQGINASIKSGLKITEHPNEVLQRVQVMEQAIQVHKLLRELHRGKVLHEKLLGVVQLP
EHLQSLVQSITQAEETYKKWLNWLTEAQVQRLTQDKEYQAALLQELPEVFEHLVAFDGLL
VSFTAAEREVAGLLLEQGIKTAKEGEALLLNSLYLAWLHELEGQHPELRMPSNGELERVE
EELQQLLLKKQELSQEIVLSRLREQAYKDIEVNRLGNPVTYRRLYAQVSKKRSLYPLRKL
FELFSEEMLDLVPCWLASPETVSAVLPLERCFDLVIFDEASQCYAETGIPAMLRGKQVVV
AGDAQQLKPSDIYRARWSGAEGEEQVEELSAESLLELCALYLPQTMLTQHYRSRYPELIE
FSNRYFYKNKLELIPELLDANARQPAITFVKVHGLWQQNQNLPEAQRVVELVLQYLQAGK
EELGVITFNYAQQMLVQDLLEEAAQAQSITVPASVLVKNIENIQGDEKEVIILSVGYAPD
EKGKMAMHFGSLNQSGGENRLNVAVTRAKQQVVVVSSIRAEQLQVEHTLHAGPRLLKDYL
HYAQQVSRRYFEYQPRRESIPAHVPLLKGMLAQQLPHLKQEVPFADLTLVKEAAYQGVVL
TDDDLYYSALSVRHSHADIPLLLRQRHWPYRSVYSRQFWEKPEKTISELKARKVKS