Protein Info for CA264_19920 in Pontibacter actiniarum KMM 6156, DSM 19842

Annotation: alanine glycine permease

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 519 signal peptide" amino acids 1 to 21 (21 residues), see Phobius details transmembrane" amino acids 57 to 79 (23 residues), see Phobius details amino acids 109 to 132 (24 residues), see Phobius details amino acids 138 to 158 (21 residues), see Phobius details amino acids 192 to 214 (23 residues), see Phobius details amino acids 239 to 257 (19 residues), see Phobius details amino acids 269 to 289 (21 residues), see Phobius details amino acids 295 to 318 (24 residues), see Phobius details amino acids 359 to 381 (23 residues), see Phobius details amino acids 399 to 424 (26 residues), see Phobius details amino acids 441 to 463 (23 residues), see Phobius details amino acids 468 to 487 (20 residues), see Phobius details TIGR00835: amino acid carrier protein" amino acids 61 to 493 (433 residues), 383.3 bits, see alignment E=7e-119 PF01235: Na_Ala_symp" amino acids 97 to 506 (410 residues), 403.4 bits, see alignment E=7.2e-125

Best Hits

KEGG orthology group: K03310, alanine or glycine:cation symporter, AGCS family (inferred from 62% identity to cts:Ctha_0201)

Predicted SEED Role

"Na(+)-linked D-alanine glycine permease"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1X9YX38 at UniProt or InterPro

Protein Sequence (519 amino acids)

>CA264_19920 alanine glycine permease (Pontibacter actiniarum KMM 6156, DSM 19842)
MKKFILSAVLSLGACSSLFAQTHKTTVDERIDAAVGPTAQFISDIIFYEVRVTDDLGIPL
ILVWLLAGALFFTFYLGFINIRGFRHALDIVRGKYNQENAPGEVTHFQALTAAVSGTVGL
GNIAGVAIAISLGGPGATFWMILAGLLGMSSKFVSCTLGVKYRDEHADGTVSGGPMHYLN
KGLSERGMAGVGKFLAVFFSIMCIGGAIGAGNMFQINQATQQFIAVTGGEASSFFGGGNA
WIFGLIMAVLVGLVILGGMKSIARVTEKVVPLMCGVYIVAAIIVLLANFSHIPEAFAAIF
EGAFTTTAIGGGVVGVMIQGLRRGMFSNEAGIGSASIAHSAVQTNVPVTEGFVASLEPFI
DTVIVCTMTALVIIVSGMYQVDSTGDGIALTSAAFATVISWFPIVLAGAVILFAFSTMIT
WSYYGLKSWTYLFGHNKAADISFKVLFCAFIVLGAPMQLGSVVAFSDAMLFAMSIPNMIG
LYLLAPVVKRDMQAFLAYARSSKKQPLTEDAVEAEAAKA