Protein Info for CA264_19335 in Pontibacter actiniarum KMM 6156, DSM 19842

Annotation: elongation factor G

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 701 TIGR00484: translation elongation factor G" amino acids 4 to 696 (693 residues), 1040.9 bits, see alignment E=0 TIGR00231: small GTP-binding protein domain" amino acids 8 to 183 (176 residues), 110.5 bits, see alignment E=7.1e-36 PF00009: GTP_EFTU" amino acids 9 to 284 (276 residues), 203.8 bits, see alignment E=4.7e-64 PF03144: GTP_EFTU_D2" amino acids 327 to 394 (68 residues), 59.9 bits, see alignment E=6.9e-20 PF14492: EFG_III" amino acids 407 to 479 (73 residues), 114.3 bits, see alignment E=5.4e-37 PF03764: EFG_IV" amino acids 482 to 601 (120 residues), 139.4 bits, see alignment E=1.2e-44 PF00679: EFG_C" amino acids 604 to 689 (86 residues), 101.4 bits, see alignment E=5.7e-33

Best Hits

Swiss-Prot: 84% identical to EFG_CYTH3: Elongation factor G (fusA) from Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469)

KEGG orthology group: K02355, elongation factor G (inferred from 84% identity to chu:CHU_3164)

Predicted SEED Role

"Translation elongation factor G" in subsystem Translation elongation factor G family or Universal GTPases

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1X9YWZ7 at UniProt or InterPro

Protein Sequence (701 amino acids)

>CA264_19335 elongation factor G (Pontibacter actiniarum KMM 6156, DSM 19842)
MNNRDLKYTRNIGIAAHIDAGKTTTTERILYYAGVSHKIGEVHDGAATMDWMEQEQERGI
TITSAATTVSWPYRGDNYHINIIDTPGHVDFTVEVNRSLRVLDGLVFLFSAVDGVEPQSE
TNWRLADNYKVARIGFVNKMDRSGADFLAVCKQVKEMLGSNAVALQLPIGSEDNFRGVVD
LVNNRGIIWNEEDKGMTFTEVPIPDDMVEEAAEYREKLLEAVAEYDETLMEKYFEDPDSI
SEDEIIAALRAATIDMAIVPMLCGSSFKNKGVQTMLDYVMALCPSPLDKESIKGINPDTG
AEISRKPDMNEPFAGLAFKIATDPYVGRLCFVRAYSGVLESGSYVFNTRSNNKERISRIF
QMHANKQNQIERLGAGDIGAVVGFKDIKTGDTLCDQSAKIILESMEFPEPVIGYAIEPKS
QADSDKMGMAIAKLIEEDPTLQVNTDEETGQTILRGMGELHLEIIIDRMKREFKVELNQG
APQVAYKETITKSVEHREVFKKQSGGRGKFADIVFEMGPREDGKQGLEFVNAIVGGVIPK
EFIPAVQKGFEEAMKNGILAGFPIDSMKVRLFHGSFHDVDSDSLSFELAARQGFKEAGKQ
CAPKLLEPIMAVDVVTPDEYTGPVTGDLNRRRGIMKGMDTKGTATVVRADVPLSELFGYV
TDLRTITSGRATASLTFSHYEQVPQNLADAIIAKIKGTAAK