Protein Info for CA264_19225 in Pontibacter actiniarum KMM 6156, DSM 19842

Annotation: guanylate kinase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 194 TIGR03263: guanylate kinase" amino acids 3 to 184 (182 residues), 208.6 bits, see alignment E=2.9e-66 PF00625: Guanylate_kin" amino acids 3 to 184 (182 residues), 154.5 bits, see alignment E=1.3e-49

Best Hits

Swiss-Prot: 58% identical to KGUA_CYTH3: Guanylate kinase (gmk) from Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469)

KEGG orthology group: K00942, guanylate kinase [EC: 2.7.4.8] (inferred from 67% identity to sli:Slin_5548)

MetaCyc: 40% identical to guanylate kinase (Saccharomyces cerevisiae)
Guanylate kinase. [EC: 2.7.4.8]; T(2)-induced deoxynucleotide kinase. [EC: 2.7.4.8, 2.7.4.12, 2.7.4.13]

Predicted SEED Role

"Guanylate kinase (EC 2.7.4.8)" in subsystem MLST or Purine conversions (EC 2.7.4.8)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

No predicted isozymes

Use Curated BLAST to search for 2.7.4.12 or 2.7.4.13 or 2.7.4.8

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1X9YX70 at UniProt or InterPro

Protein Sequence (194 amino acids)

>CA264_19225 guanylate kinase (Pontibacter actiniarum KMM 6156, DSM 19842)
MQGKIIIFSAPSGAGKTTIVKHLLSVNPQLNFSISACTRDKRGRTEENGKDYYFITPEDF
KKKIANDEFVEWEEVYEGAFYGTLKSEIERIWKSGKHVILDVDVKGGLSIKHFYKERALA
VFVKPPSIDELAKRLTARNTDSASSISSRVFKAKFEMGFEDQFDKVIVNDDLTRACTEAE
KLVNDFLKSEPAIV