Protein Info for CA264_19195 in Pontibacter actiniarum KMM 6156, DSM 19842

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 750 800 850 900 950 990 signal peptide" amino acids 1 to 21 (21 residues), see Phobius details transmembrane" amino acids 739 to 758 (20 residues), see Phobius details PF07494: Reg_prop" amino acids 34 to 56 (23 residues), 16.8 bits, see alignment (E = 1.8e-06) amino acids 75 to 97 (23 residues), 17.5 bits, see alignment (E = 1.1e-06) amino acids 281 to 304 (24 residues), 22.1 bits, see alignment (E = 3.5e-08) amino acids 324 to 345 (22 residues), 20.5 bits, see alignment (E = 1.1e-07) amino acids 527 to 549 (23 residues), 15.1 bits, see alignment (E = 6.5e-06) PF07495: Y_Y_Y" amino acids 669 to 730 (62 residues), 49.3 bits, see alignment 1.1e-16 PF07568: HisKA_2" amino acids 794 to 869 (76 residues), 91.3 bits, see alignment 1e-29 PF07536: HWE_HK" amino acids 794 to 848 (55 residues), 31.1 bits, see alignment 9.9e-11 PF02518: HATPase_c" amino acids 893 to 989 (97 residues), 46.6 bits, see alignment E=1.3e-15

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1X9YWU3 at UniProt or InterPro

Protein Sequence (990 amino acids)

>CA264_19195 hypothetical protein (Pontibacter actiniarum KMM 6156, DSM 19842)
MHCLRAILFLCLLLTTAVGAAQQYNIRSWTLEQGLPQSQVMAIQQDHEGFLWLATRAGLS
RFNGTDFTTYTKEEGLSSHNISTLFLDSRHRLWVGTTDAGLLLFNGVSFQPYGQEQGVGA
KAVRGITEDKAGKLWLATDNGVYSLAREGMLKYASLPDLNYTAVTATPTGELWAGTADNG
LYRVKGSQTTHFTAGNSELPSNHITALSVSKSHEVWIGTAKGLAQAEQTTLSRVQLPQHL
DSSRITSFTSDHYNNLWVGLQRNGLLKYNGDSFTHITRNGGLRTNRITALSTDKEGNVWI
GTNGYGLQQHMAPWFVHFFEFPNLTEPRVTAIAQDRNGTLWLGTDEGELAKMEQHNLTWL
SRKPWPQGTTVYSFLPTPEALWACTSNGVWRLAQQTTTHYSTAEGLPSLDVYQATAGPDG
QLYLATGGGVAVLQGSTFRLLPSPEGTLKANSILRDSKGRIWAGGDKGIFRVERGQVVQP
PELQGLHLTEVRSITEDKKGVLYFAAFNTGILMLQGTKATLVTAAEGLPSEAVKSVYADS
ADNLWVATSRNVLKARLPALRQEGAFNHRSYSGPSGFRGMEVCDNAMLQTQEAVWFGTTK
GLTKYLPGLDRRNKVPPRLTLTEVLLYSRPTDWEALGYAYDSLTGLPVNLRLPHTQNHLA
FNFQGICLSAPEQVKYKYRLVGYEDAWSPVTSRSFSTYANLSPGTYTFELMGQNNDGYWT
PQPLTYTFSIVPPIWRREWFIGVLLVVIAGTILSVVRLRERSLVKMNSLLELKVNHRTRL
LERQNREKEILLQEIHHRVKNNLQIVISLLNLQARHVEDPSAQEVMKALRSRVRSMSLLH
ERLYQHSNLEHINLEDYFIEICESLYASYGVSMDRIALELDVPDIKVDVDSAITLGLIVN
ELVSNTLKYAFQEGEHGVLRIELIRHDEVQYTLTVSDNGRGLPEDFFLKQQKGQSFGLKL
VQSLSKKLEGNIRFYNNNGTKSILYFVLPS