Protein Info for CA264_18375 in Pontibacter actiniarum KMM 6156, DSM 19842

Annotation: T9SS C-terminal target domain-containing protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1000 1074 signal peptide" amino acids 1 to 22 (22 residues), see Phobius details PF11999: Ice_binding" amino acids 37 to 221 (185 residues), 101.4 bits, see alignment E=1.4e-32 PF01345: DUF11" amino acids 231 to 346 (116 residues), 77.1 bits, see alignment E=3.5e-25 amino acids 357 to 469 (113 residues), 108.3 bits, see alignment E=7.5e-35 TIGR01451: conserved repeat domain" amino acids 236 to 288 (53 residues), 39.9 bits, see alignment 4.1e-14 amino acids 362 to 408 (47 residues), 51.6 bits, see alignment (E = 8.8e-18) PF07705: CARDB" amino acids 356 to 467 (112 residues), 23.9 bits, see alignment E=1e-08 PF19408: PKD_6" amino acids 481 to 554 (74 residues), 22.2 bits, see alignment 3.5e-08 amino acids 562 to 634 (73 residues), 43.7 bits, see alignment 7e-15 amino acids 646 to 721 (76 residues), 61.6 bits, see alignment 1.9e-20 amino acids 734 to 810 (77 residues), 73.4 bits, see alignment 3.8e-24 amino acids 815 to 896 (82 residues), 66.1 bits, see alignment 7.2e-22 amino acids 899 to 978 (80 residues), 80.9 bits, see alignment 1.7e-26 PF13585: CHU_C" amino acids 991 to 1070 (80 residues), 80.8 bits, see alignment 1.7e-26 TIGR04131: gliding motility-associated C-terminal domain" amino acids 991 to 1074 (84 residues), 55.6 bits, see alignment 6.8e-19

Best Hits

Predicted SEED Role

"internalin, putative" in subsystem Listeria surface proteins: Internalin-like proteins

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1X9YWC3 at UniProt or InterPro

Protein Sequence (1074 amino acids)

>CA264_18375 T9SS C-terminal target domain-containing protein (Pontibacter actiniarum KMM 6156, DSM 19842)
MIKSLLLTFLLLIGSITFSFAQTEGEIMGQATNFAVLASEKIIVNDLSGVTGSVGISSAD
DIENRSLLSIQEGSVQTGVYAANALNDATAAYDRFYGKSTATLPTTFKGDKDGIRPGHYK
ITGLAGFESVLTLNAEGDPNGMYVFEIDGDLISKAPNAAIRLVYAQSKNVYWLVTGRVEL
GGITNFVGTILAKGDVYLEDGVGVNGRAISLGGTVTLDRNNLYLPGIVRTDVKVVKTAPD
QLYRLGDEITYTIAVTNSGPGTAFDVSVLDELPLTGLQYVAGSAAFDGSSSSFDPAALRW
SIPELGFAEKKEITLTFRITATGAITNVATAASRDPDPREEDNRSIWTIQVPELNADLSI
TKTAATAPYTVGGEVTYTVTVKNNGLYEAKGVVMTDALPDGLTFVSSSEGSYNAATGKLV
IGTMAAGAEKTITLKASINKAGTLVNTASVVSSPEVPDTNLDNNNATAVIDVGCVELTGL
ALTGNLNLCEATAGAEYIATEIPGAVYKFTTTGGVQVVSSVGNKAVVAIGATSGTLAVIV
TDPCGGRNTSALNIGVIPNISGVTVAGPGEVCANSTDIKFTAPAYEGNITYRWIASGGLT
ITSATNEAEVKVKAGAVGGVLTLEVNNGCSVVTGTKNVKVRPTLVGPTAITGEAVVCAGT
RQTYTAAGDVGASSYTWRLPDGWELAPGTAADQQEINVIVGTAGGEIQVIANNECGTSDT
GAAITVAVNNKPDLPTITGQRGACVGEILTYSVLDVADATDYSWNVPETWGLISGANTRS
INVRVGPGTGEVTVAVTNGCGTGQTAEMEVAPTLAPAAPVISGTTDVCEGSQGLVYTITN
PEAGVTYSWALPQGWSFANNNSTGTSVTVTAGSAGGSITVEGTNSCDTAEGQPLQVNVSA
PPVAPGQITDKSNVCEGLVFAIDPVQGAESYTWAVPSGFTITSGQGTTTITVKADKADAT
GRVTVVATNGPCSSIEASATIDASKADGNLEFPKAFSPNGDGIRDTWEIKNLEKFPVNEV
VIFNRWGSEVFRTKGYQNNWSGNKLEQGTYFYKVRVTVCDGVVKEFTGYTTLFR