Protein Info for CA264_18255 in Pontibacter actiniarum KMM 6156, DSM 19842

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1000 1128 PF00512: HisKA" amino acids 352 to 417 (66 residues), 51.2 bits, see alignment 3.8e-17 amino acids 895 to 954 (60 residues), 28.9 bits, see alignment 3.3e-10 PF02518: HATPase_c" amino acids 470 to 572 (103 residues), 95.9 bits, see alignment E=7.1e-31 amino acids 1006 to 1111 (106 residues), 73.1 bits, see alignment E=8.7e-24 PF00072: Response_reg" amino acids 640 to 751 (112 residues), 92.3 bits, see alignment E=8.2e-30 TIGR00229: PAS domain S-box protein" amino acids 762 to 871 (110 residues), 27 bits, see alignment E=2e-10 PF00989: PAS" amino acids 764 to 854 (91 residues), 25.7 bits, see alignment E=3.5e-09 PF08448: PAS_4" amino acids 769 to 867 (99 residues), 36.9 bits, see alignment E=1.4e-12

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1X9YWA5 at UniProt or InterPro

Protein Sequence (1128 amino acids)

>CA264_18255 hypothetical protein (Pontibacter actiniarum KMM 6156, DSM 19842)
MESESKSTKTYFRGGGEMGDLIRQLAWEKTPLGPVAEWPQSLRTAVNIMLSSKIPMMIHW
GPELIHFYNDGYATIMQTKHPGALGEPAYPWWSEMWDFLTPIFDQVKAGETTYFKDQLVL
PNRSGFIEEAYFTFSHSPIYNEEGDVAGIYATAIETTSDVVSRRRLAMLSHLSSYSTQMR
EPAAACQAVSDSLATNPEDVPFALVYLLDETGEKATLAGITGITAGKKESPEVVDLQEDD
AACPWPLAQATKAGAPVLVTDLQERLGTLTAGAWPEPLKQAMVLPITKVGQNATSLPYAI
LVAGISPRRQVDEAYSSFYTLVANHIGRTIANAKAYEEERRRTEALAALDKAKTDFFQNI
SHEFRTPLTLMLGPLGDLIESGLPQEAQEQLVMVERNGKRLLKLVNNLLSYAQAEAGRLK
AQFQPVEIAQVTRDLSSYFRSAIESAGLVFHVNLTPVTAPVYLDADMWEGIIFNLLSNAL
KFTFKGQISLTLQQQNEQVILTVADTGVGVPAEEVPRLFSRFHRIAGTHGRSHEGSGIGL
ALVQELVKLHGGTVRVASALGEGTTFTVTIPTGKSHLPAALLAPSTAAAADSQPQPQAPG
NYGSSFGAGAGLTYQYSAASDTANVRYAPEAEDAPEHPLILVVDDNEDMLHYLKRVLGQD
YRVQTAANGAAAWKLILQSHPALVISDVMMPEVDGFELLEQIRSDERTRLQPVMLLSARA
GEEARAEGMEHGADDYLVKPFKTRELKARVKANLELAQLRSKLTAVVTSMAEGFAVLDHH
LRFTFTNARVLRLLGKEGAHVNGQLLENVVPTSVFKALKARIALSQKDELTRTFEFLEKG
RNRWLEVRIHPLAEGTAFLLTDITFRKKAKSSLEHTLEETASRNTALMKVNETLDNFVNI
AAHDLKSPINNLKSLLELHQRESDPAMQRASISRIETSVKKLDLTVTGLLSIVQFQAKGD
RGTHEIKFEELFRELQEEFAEELQAQNGQLAADFYEAESIVYIEAYLVSIIRNVVQNALK
YKSPTRPPIIHLHTERDHDTVLLRVSDNGIGIDLERYGHHLFKPFKRFTKAAEGNGLGLY
LVKNMVERNGGSLEVESRLAQGTTLKIYLKEYARTAVQPTSAPEDLAL