Protein Info for CA264_18145 in Pontibacter actiniarum KMM 6156, DSM 19842

Annotation: ribonuclease

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 437 PF03993: DUF349" amino acids 95 to 163 (69 residues), 42.3 bits, see alignment E=3.8e-15 amino acids 167 to 241 (75 residues), 56.6 bits, see alignment E=1.3e-19 amino acids 246 to 321 (76 residues), 48.2 bits, see alignment E=5.7e-17

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1X9YWB8 at UniProt or InterPro

Protein Sequence (437 amino acids)

>CA264_18145 ribonuclease (Pontibacter actiniarum KMM 6156, DSM 19842)
MENNNLLEEAKKYGFIQDQQVWLKPFMNYPARQVGEVKETEDDSLVYFAKRFEMFRDKVN
SLLDRIATSENKGSFLMKVLHMKEQVGSYDALGDFEEIYHTLSKSEEEINETIKQNREKN
LSIKIGLIQEAEAHSESIDWKEATEKLKDLRTTWIKTGPVEKELTDEIEERFRNAVENFF
ERKKNFFEDKKRMQNRAYERYRELINQSYAIMNSEEWEETTAKLKQLQNQWKEVDGTLPR
KTMTNLWNSFRKAHNHFFERLKRKIQKEKNASREQFYEQNYESKQALASQAEQLLQEYSL
GEAVKRAKELQAEWKKVGPVSPEVSDAVWERFIKACDRVFEMSSLEHYIRKRQQASNETF
SETDGLQARINALKDFIKSDRNELEVLETNLGKLNDSPSNDTFRNMLKGKIRNFNRKIGT
KTALIEMFQSQLSAISR