Protein Info for CA264_18100 in Pontibacter actiniarum KMM 6156, DSM 19842

Annotation: ABC-ATPase UvrA

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 750 800 850 900 971 TIGR00630: excinuclease ABC subunit A" amino acids 30 to 941 (912 residues), 1339.4 bits, see alignment E=0 PF17760: UvrA_inter" amino acids 156 to 262 (107 residues), 116.5 bits, see alignment E=1.6e-37 PF17755: UvrA_DNA-bind" amino acids 316 to 416 (101 residues), 80.7 bits, see alignment E=2.9e-26

Best Hits

KEGG orthology group: K03701, excinuclease ABC subunit A (inferred from 71% identity to lby:Lbys_2733)

Predicted SEED Role

"Excinuclease ABC subunit A" in subsystem DNA repair, UvrABC system

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1X9YW80 at UniProt or InterPro

Protein Sequence (971 amino acids)

>CA264_18100 ABC-ATPase UvrA (Pontibacter actiniarum KMM 6156, DSM 19842)
MALNQEQPTTTTGTDTSAVMPGSNGDAQQIEVYGAREHNLKNISIKLPRYKLVVFTGISG
SGKSSLAFDTIYAEGQRRYMETFSAYARSFMGGLERPNVDKIEGLSPVISIEQKTTSRNP
RSTVGTITEIYDFMRLLWARTAEAYSYVTGEKMVRQSDDQIVNHILENFDGKRIVVLAPV
VKGRKGHYRELFQQIRKMGFIRARVDGELVEIAPKMQVDRYKIHDIEIVIDKIVVKEEDR
FRLSGSIQNALTHGKGTALILDADADKTHFFSRHLMDPATGIAYDDPAPNSFSFNSPYGA
CPVCNGLGEIQEITEETVIPDKELSIRRGGIAPLGEYRDIWIFKQIEALFKHFKASVATP
IKDLPEDLLQVLLYGLEEDLEVKTKKGNYVVEFEGIINFLKNQMESDSDSIRSWVEDFTQ
TTTCPECNGYRLKKESLHFKIADKNIGELSVLDITKLAAWFEALEDRMSERQNVIAKELL
KEIRKRIGFLLDVGLDYLSLHRPVRTLSGGESQRIRLATQIGTQLVGVLYIMDEPSIGLH
QRDNERLINALKDLRDLGNSIIVVEHDKDMILQSDYVVDIGPGAGIHGGQVVTAGTPETM
MNAGTTTADFLSNRRGIAVPREKRPGTGQTLRLIGATGHNLKNVTLELPLGKMICVTGVS
GSGKSSLIHDTLYPILNTHFFRAKREPLPYKSIEGLEHIDKVIEVDQSPIGRTPRSNPAT
YTGVFTDIRSLFAQLPEAKIRGYTPGRFSFNVKGGRCEACEGAGMRTIEMNFLPDVYVPC
EVCKGKRYNRETLEVRFKGKSITDVLEMTVEQAVEFFESQPRILRKIQTLNEVGLGYITL
GQQATTLSGGEAQRVKLATELSKKDTGQTLYILDEPTTGLHFQDIEHLTEVLHKLTNKGN
TVLIIEHNLDLIKVADYVIDIGPEGGEGGGTIVAAGTPEEVVAAGKGYTSRFLEEELKTS
HYTEGPSAPQD