Protein Info for CA264_17950 in Pontibacter actiniarum KMM 6156, DSM 19842

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 330 transmembrane" amino acids 6 to 45 (40 residues), see Phobius details PF12127: FloA" amino acids 6 to 316 (311 residues), 536.4 bits, see alignment E=1e-165

Best Hits

Swiss-Prot: 77% identical to Y1337_AMOA5: UPF0365 protein Aasi_1337 (Aasi_1337) from Amoebophilus asiaticus (strain 5a2)

KEGG orthology group: None (inferred from 78% identity to mtt:Ftrac_3711)

Predicted SEED Role

"DUF1432 domain-containing protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1X9YW50 at UniProt or InterPro

Protein Sequence (330 amino acids)

>CA264_17950 hypothetical protein (Pontibacter actiniarum KMM 6156, DSM 19842)
MELSAIFLIAGGIILLIIFLYFVPISLWITALFSGVRVGLAELIFMRIRKVPPSLIVNSM
INSTKAGIDLTTTELETHYLAGGNVPMVIKALISADKANIPLSFKQATAIDLAGRNVFEA
VTTSVNPKVINTPNVAAVAQDGIQLIAKARVTVRANINQLVGGAGEETILARVGEGIVTS
IGSSTSHKSVLENPDMISKLVLQKGLDAGTAYEILSIDIADIDVGENIGAKLQIDQAGAD
LRVAEAKAEERRAMAVAVEQEMKAKAQEARANVIQAEVEIPQALAAAFRSGNLGIMDYYR
MQNIQSDTDMRNSIANPGQQQQGSANRPKE