Protein Info for CA264_17310 in Pontibacter actiniarum KMM 6156, DSM 19842

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 378 transmembrane" amino acids 36 to 54 (19 residues), see Phobius details amino acids 60 to 83 (24 residues), see Phobius details amino acids 91 to 112 (22 residues), see Phobius details amino acids 132 to 149 (18 residues), see Phobius details amino acids 157 to 174 (18 residues), see Phobius details amino acids 180 to 199 (20 residues), see Phobius details amino acids 210 to 228 (19 residues), see Phobius details amino acids 244 to 263 (20 residues), see Phobius details amino acids 283 to 300 (18 residues), see Phobius details amino acids 306 to 325 (20 residues), see Phobius details amino acids 347 to 368 (22 residues), see Phobius details

Best Hits

KEGG orthology group: None (inferred from 55% identity to cts:Ctha_1384)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1X9YVW5 at UniProt or InterPro

Protein Sequence (378 amino acids)

>CA264_17310 hypothetical protein (Pontibacter actiniarum KMM 6156, DSM 19842)
MGKVKKAKKNVAPIQPYKFRKRYKQVDIYIRKEKNFLYFIAFSLILAGLVYPYASIAMWV
GFAFAGYSAIANDSIQTIGTFIVSNEDKKWYWQWLFMGSIFLGTVFYSWYAFDGDVTYQR
LSSKGFDQTIDNFVYLQLAAPIVLLLLTRFRIPVSTTFMLLSVFTVSSGAIVSMVSKSLM
GYVAAFIAAFIIYLALSKLIKRFVKGKAHGSWIVAQWVISGFLWHTWLAQDLANVAVYLP
RQLGVWEFAAFAGFIFIGLGFMFYRRGEKIQNIINEKSEVRDVRSATIIDLVYSIILYYF
KEVNNVPMSTTWVFVGLLAGRELGMRLRAHDSSVKFAKTFNLIGKDVLSVTIGLVISIIL
AVSINPVIQEELMNFFFK