Protein Info for CA264_17270 in Pontibacter actiniarum KMM 6156, DSM 19842

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1000 1103 transmembrane" amino acids 21 to 44 (24 residues), see Phobius details amino acids 57 to 79 (23 residues), see Phobius details amino acids 158 to 177 (20 residues), see Phobius details PF13779: DUF4175" amino acids 294 to 500 (207 residues), 45.4 bits, see alignment E=1.6e-16

Best Hits

KEGG orthology group: None (inferred from 44% identity to dfe:Dfer_3800)

Predicted SEED Role

"liver stage antigen, putative"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1X9YVT4 at UniProt or InterPro

Protein Sequence (1103 amino acids)

>CA264_17270 hypothetical protein (Pontibacter actiniarum KMM 6156, DSM 19842)
MKHTDALDQLLHQLQEFKQKFYLNMLLRGSIFAVGLLLSVYIVYSLLEYMFYFPEYVRAF
LLFSFVAAVVYVFVRWIALPVSALTRLRRLLSDEQAAQQVGAYFPEIRDKLLNAIQLQHQ
DRTNELIRASIDQRSQQLLSFRFREAVTYSENKPLLKYIALPALAAVLIMLVYPAIFVQG
TERIINYKTHYTPQAPFNFLVKNDALQTYRGEDFELQVAVVGEAVPREVYINYNGRRQQL
SQRADGSYTYTFKQLQRPVDFQLEGSGFFSDNYTLDLLSRPNLKDFRMLVQYPQYLKRKP
EEIQNTGNATVPEGSTITWNFSTSETDSVKLIFEEPAQRIVAQKDGDTFAASKDINRSQN
YSISLRNEHSANKGEINYQITTIPDRNPQISLEQFQDTALYSYLVLGGDVSDDYGLTRLA
LFYRVSNAKNPLAKYTAQALPLNRQQPSQTYYYQWNTAALNMQPGDKLEYFVQVWDNDGI
RGPKSTRTRTFELRLPDKRELQKELDSNSQSVASQMSKTLERANQLKRELAKSEDKLKTK
RDLNWQDKKQLEDLATKKKQLEQDINSMKELFEELNKKQNMLNEPNKQLAEKAQELQKLM
NDLLDPETKKLYEELEKLLQQQQPNDTELQKLLSKLDNREKNLERELERALELFKQLQFE
QKLDNVAQKLEEMGEKEQQLAQKTEQKQENNEQLQEQQQELQQEFEDVKEQLKELKELNE
KLEHPNSMDEQQQQQEQQSIEQQMKQSQEQLQKNQNKKASESQQKAGKQLQQMAQQMEQM
KSSMSMSGMQQNLDNLRDILENLITLSFDQEEVMKQLRSVSQSDPRFIELSQQQLSLRDN
AQVIEDSLFALSKKVFQIESFVTREVAAMNQSMDNSMQELRDRNLGKATAQQQLAMTSMN
NLALMLNDALKQMQQAMQQMQGSMAGKQKGNKPRPGNMGELQQQLNKKIEDLKKGGKSGK
ALSEELAKLAAEQEALRNAMKELEKQGKKPGEKGQNGDLGNIGKMMEQTETDLVNKRLTE
QTIMRQREILTRLLEAEKAAKERELDNKREAKTAQEIARKVPPSFEKYLKAKEKQTELLK
TIPPALSPYYKQKVSEYFQNISK