Protein Info for CA264_17085 in Pontibacter actiniarum KMM 6156, DSM 19842

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 410 signal peptide" amino acids 1 to 24 (24 residues), see Phobius details transmembrane" amino acids 265 to 283 (19 residues), see Phobius details amino acids 290 to 312 (23 residues), see Phobius details amino acids 319 to 338 (20 residues), see Phobius details amino acids 350 to 368 (19 residues), see Phobius details amino acids 374 to 393 (20 residues), see Phobius details PF13387: DUF4105" amino acids 34 to 170 (137 residues), 102.2 bits, see alignment E=1.3e-33

Best Hits

KEGG orthology group: None (inferred from 41% identity to rmr:Rmar_1839)

Predicted SEED Role

"FIG00930218: hypothetical protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1X9YVY6 at UniProt or InterPro

Protein Sequence (410 amino acids)

>CA264_17085 hypothetical protein (Pontibacter actiniarum KMM 6156, DSM 19842)
MKNYIKKITLALLLSLFTLPSWAQFEEMQLSPQAKISLITCSSGPELYAIFGHSAVRVND
PASGLDIIFNYGTFDFNEPNFYLKFARGKLRYKLSVAYFRDFVYSYSMDNRSVYEQELNL
TEAEKQKYWAFLTNNYLPANRFYLYDFFFDNCATRIRDGLEATFPNQLAFNISQFDKDYS
FRNLIDLYLGPQPWGDFGIDLALGARIDQEATPYQYMFLPEYLSKGFANATLAQGGQPKP
LTLERRVIFERDPIPMEAGWFTPQLLLWAFLLVTVALTVADFVKRRRSRVFDMVLFFLMG
LLGIVLLLLWFATDHQATAYNFNLLWAVPTHAVVAFFLGRQVLREWVRKYMLVTAILAAV
VLIGWPLWPQLYHAAFLPLVVALALRAAYTVWFSKKATAVVTNQSVEQKI