Protein Info for CA264_17050 in Pontibacter actiniarum KMM 6156, DSM 19842

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1000 1100 1200 1300 1400 1500 1600 1700 1800 1949 signal peptide" amino acids 1 to 33 (33 residues), see Phobius details PF01833: TIG" amino acids 177 to 253 (77 residues), 30.8 bits, see alignment (E = 2.4e-11) amino acids 260 to 332 (73 residues), 29.2 bits, see alignment (E = 7.4e-11) amino acids 616 to 692 (77 residues), 20.4 bits, see alignment (E = 4.1e-08) amino acids 713 to 777 (65 residues), 23.2 bits, see alignment (E = 5.5e-09) amino acids 784 to 860 (77 residues), 23.7 bits, see alignment (E = 3.9e-09) amino acids 865 to 923 (59 residues), 27.3 bits, see alignment (E = 3e-10) amino acids 953 to 1028 (76 residues), 19.9 bits, see alignment (E = 5.9e-08) amino acids 1049 to 1122 (74 residues), 20 bits, see alignment (E = 5.5e-08) amino acids 1303 to 1379 (77 residues), 21.2 bits, see alignment (E = 2.3e-08) amino acids 1389 to 1429 (41 residues), 21.1 bits, see alignment (E = 2.5e-08) amino acids 1494 to 1560 (67 residues), 20.3 bits, see alignment (E = 4.6e-08) amino acids 1565 to 1644 (80 residues), 24.8 bits, see alignment (E = 1.8e-09) TIGR04183: Por secretion system C-terminal sorting domain" amino acids 1871 to 1948 (78 residues), 33.5 bits, see alignment (E = 1.6e-12)

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1X9YVP4 at UniProt or InterPro

Protein Sequence (1949 amino acids)

>CA264_17050 hypothetical protein (Pontibacter actiniarum KMM 6156, DSM 19842)
MAQLYNPPIHRLLRALLLQCLFLTGLITQGFAQTAAPALASFDGPWAKGAQAGIATAGLS
ADGAELDPSTSGGSAQFKSTSSVVTVNFGAVPAGARLSFSLKAATTQETYSTSMTVESST
DGVDYSSTLATISGQSKDEQSRYSYSLPENTTHVRFRMTGRTDANLLLDAIKVAVAPEIF
SFSPAEGGFNTPVTIVGSGFTGATAVYFGGVAATVVSVNSDTEIIANVPAGAPTGKIAVE
LPSGTSESYTDFTVYAPVITTKLSPLSGAAGTIVTINGQYFSGATEVAFNGVTGSIVAGS
VSDTQLKAVVPLGATTGKVSVTTPAGTGKSIALFTVPAPAFTAPEFTPATAATDAALTIS
GTGLSSVTKVTFLGVEADASDDVTVDVASPASSDTELVVNVPATAKTGKLKLTSLNGTAT
STGTFTFIPAPVIASFSPAVGLAGTEAAPGTEVTITGRNFEGVTQVAFANNATIDVTGAA
LVDNGDGTSSFRVTVPQGAVTGPLSVTTPGGTATSTENFVVYQTPVIASFTTTARPGDVI
TITGSGFTGVEQVTFLGLSENGADDLSVATTSVTDTEITVVVPTGAVTGELAVTNAAGTG
TTGALTPSEFTVDPTPYISSLSPAEGIVGDNITIIGQNLSGATAVTFFNDIPADLTNVTV
VTEENGIQSLTVAIPAGATTGAVSVTTDAGTATSTEELTVILDPINIAFATTEGRAGDTF
SITGDNFTGVTAVTVGGEAVDYTFVDDKEIKVTLTPNAVTGVIAVTNAAGTGVSEGEFTV
LTTPLITGFNPVKGLVGTEVTITGKLLSQIDGVTFGASAAVAPVSASATQVVVLVPADAT
TGTITISGANGTATSTESFTVVLPPQIADFSPKVGPVGTEVTITGNNFTDISAVKFNDLD
AVSYTVTADGDSITAIVPEDAAKGFITITNPAGTASTEGMEGIESTMFEVPAPSITGLDK
TEGFVGEPVVIAGQYFTGADSVMFNGVTSASFTVDNDGQITAYPPAGAGEGVITVYTTSG
SGSSESLFKVLSPEITDVYVNVPENTVNEGYAGTEVTIVGNYFQGTDIEVKFGEVTATFT
PVAGEETTKLVAMVPQARFNQSVAPISVTTESGTGESEETFKTLVPEQITFTPAQGRVGD
EVTVSGVYLKNVVSINFNGASVGISSEGQTNPTGDEVTSFTVQVPVDANTGVISVTTTSG
TGASATNFTVLAPDVMTIDPTEGRVALTVVKITGQYFDQASKVTFLGDVTTSADDVVLST
GSFSVVSDTEISVEVPAGAKTGPIAVTTPSGTDNSPTFTVLAPVITSFSPEKGQVNRTMF
AINGQYFTNATKVTFLSGSAPDVDATMFFVNTDGQLTVAVPVGAKTGRISVTTPSGTAIS
EMDFTVLTPFITSIEPTEGSKVGETITITGSYFEDLIKVVFRGPNAASTADDVEVQAADL
LSKSGTVLTLAVPQGARTGSIGVETLSGTGVSASYKIIPELYDFYVTGEPGVKEGPFGTS
ITIKGMSLINATRVTVNGVTATNLVRVDNETLTARIPTGSRTGKIAVTTPGGTVTNTEDF
VVTSPIIDNLTPTSGKIGSTLVIKGVNLHDVGKVEFGNGVATSQFTESADGASLSVVVPK
GAATGKVTVYTLAGPAAVSSQTFTVIVPVITVSTNELNFTAKAGEESAVQTYTVSATNLE
SAVTVTAPRGGLFLISADGVTFGGSLTLAQPADNTLAPTTVYVKFSSADEDFYVSSISHT
ATNAVTKSVTVTGNSTPPTTPLPVELVSFNATVQGEKAQLTWVTASEENNSHFEVEMSLN
GVGGFVKVGRVNSKLTNSTVRTTYGFTHSLGNESGTRYYRLKQVDLDGTSSYSKVVAVAV
KARELVQQLLVAPNPINYNSKVFITAEVEGKAALKLHSISGKKVYAKVIELHQGQNEVQL
PVYDKLTKGMYVLTVELNGQVYQVKVLKE