Protein Info for CA264_16940 in Pontibacter actiniarum KMM 6156, DSM 19842
Annotation: nicotinate-nucleotide diphosphorylase (carboxylating)
These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.
Protein Families and Features
Best Hits
Swiss-Prot: 47% identical to NADC_ARATH: Nicotinate-nucleotide pyrophosphorylase [carboxylating], chloroplastic (QPT) from Arabidopsis thaliana
KEGG orthology group: K00767, nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC: 2.4.2.19] (inferred from 66% identity to mtt:Ftrac_2356)MetaCyc: 45% identical to quinolinate phosphoribosyltransferase (decarboxylating) (Nicotiana rustica)
Nicotinate-nucleotide diphosphorylase (carboxylating). [EC: 2.4.2.19]
Predicted SEED Role
"Quinolinate phosphoribosyltransferase [decarboxylating] (EC 2.4.2.19)" in subsystem NAD and NADP cofactor biosynthesis global or NAD regulation (EC 2.4.2.19)
MetaCyc Pathways
- NAD de novo biosynthesis II (from tryptophan) (9/9 steps found)
- NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde (4/4 steps found)
- superpathway of NAD biosynthesis in eukaryotes (11/14 steps found)
- NAD de novo biosynthesis I (4/6 steps found)
- NAD de novo biosynthesis III (4/6 steps found)
- NAD de novo biosynthesis IV (anaerobic) (4/6 steps found)
- aspartate superpathway (17/25 steps found)
- nicotine biosynthesis (1/9 steps found)
- superpathway of nicotine biosynthesis (2/12 steps found)
KEGG Metabolic Maps
- Biosynthesis of alkaloids derived from ornithine, lysine and nicotinic acid
- Nicotinate and nicotinamide metabolism
Isozymes
No predicted isozymesUse Curated BLAST to search for 2.4.2.19
Sequence Analysis Tools
PaperBLAST (search for papers about homologs of this protein)
Search CDD (the Conserved Domains Database, which includes COG and superfam)
Predict protein localization: PSORTb (Gram-negative bacteria)
Predict transmembrane helices and signal peptides: Phobius
Check the current SEED with FIGfam search
Find homologs in fast.genomics or the ENIGMA genome browser
See A0A1X9YVN2 at UniProt or InterPro
Protein Sequence (285 amino acids)
>CA264_16940 nicotinate-nucleotide diphosphorylase (carboxylating) (Pontibacter actiniarum KMM 6156, DSM 19842) MKPTYLTENSISEFIARALAEDVGDGDHSSLAAIPADAQNQARLLVKGEGILAGVELAGY IFRAVDPALQLDVLLKDGTAITYGDVAFTVKGKAQSILTAERLVLNCMQRMSGIATYTHY LASLIEGTGAKLLDTRKTTPNFRIIEKWAVVIGGGQNHRFGLYDMVMLKDNHVDYAGGIR EAITATQQYLQEKGKSLKIEVETRNLQEVQETLETGGIDRIMLDNMSTDMMREAVRMIGG KYETEASGGITEETIRAVAECGVDFISVGALTHSNRSIDLSLKAF