Protein Info for CA264_16760 in Pontibacter actiniarum KMM 6156, DSM 19842

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 607 signal peptide" amino acids 1 to 21 (21 residues), see Phobius details transmembrane" amino acids 563 to 584 (22 residues), see Phobius details PF07244: POTRA" amino acids 208 to 271 (64 residues), 22.5 bits, see alignment E=1.5e-08 PF01103: Omp85" amino acids 308 to 607 (300 residues), 37.8 bits, see alignment E=1.8e-13

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1X9YW05 at UniProt or InterPro

Protein Sequence (607 amino acids)

>CA264_16760 hypothetical protein (Pontibacter actiniarum KMM 6156, DSM 19842)
MYKIAAFLFSLVLWLPQARAQVAEQKAAPVKVEQAKQPEKQVEKPEKGQAKVQLSVKALG
VDGAQTLKRYNFRQALPDSAEALKELRALVYRLQQDAYLLASADSMYFSGDTLHVKLHVG
QPFEWAQLRNGNLSEGLLVESGFREKFYHSTPFRPADYVKLQQRVLDYAERNGYPFATVW
LDSVSIKGNKVEAALMVEKAFVVTYDTLEIVGKTKTQPKFLMRYLQLLPGQLYNQDQVDA
SQRMLTQLPYIKVTRSPQVRFLSDKAKVYYYLEDRQANQIDGVVGFLPDPNRADKLLVTG
EANLNIRNIGGSGKQLGLQWRRVSAGSVVLNGEYLHPNLFGSPFEAGLKFNLLKQDSTFI
TVQPRLQIGYYTLRYGKFSVFTEWRNSRILSEVSPQRLQQLDLADAQTTTYGLNYLWNNL
DDFYYPRRGRLVELQFSAGTKKLLRNADLEKSFYDTLEVKSSQLSLALRLENFLRLGKNS
ALLTRLRGEALFSDRIFLNDMYRLGGLSSLRGFDDYFFYASSYGVGTLEYRLFTASDSYV
LLFYDQGYYRSDLQAAKLSDYPFGLGAGISFSTGAGIFQLVYSLGQSEQQPLSFKHSKIH
FGITSKF