Protein Info for CA264_16725 in Pontibacter actiniarum KMM 6156, DSM 19842

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1000 1100 1200 1300 1400 1500 1600 1651 signal peptide" amino acids 1 to 25 (25 residues), see Phobius details PF11999: Ice_binding" amino acids 39 to 222 (184 residues), 120.4 bits, see alignment E=1.7e-38 PF01345: DUF11" amino acids 242 to 339 (98 residues), 49.6 bits, see alignment 9.7e-17 TIGR01451: conserved repeat domain" amino acids 244 to 270 (27 residues), 24.5 bits, see alignment (E = 1.7e-09) PF19408: PKD_6" amino acids 351 to 435 (85 residues), 61.8 bits, see alignment 1.3e-20 amino acids 441 to 523 (83 residues), 93.3 bits, see alignment 1.9e-30 amino acids 528 to 605 (78 residues), 64.9 bits, see alignment 1.4e-21 amino acids 616 to 697 (82 residues), 90 bits, see alignment 2e-29 amino acids 702 to 783 (82 residues), 88.1 bits, see alignment 7.7e-29 amino acids 788 to 870 (83 residues), 89.5 bits, see alignment 3e-29 amino acids 874 to 957 (84 residues), 91.4 bits, see alignment 7.1e-30 amino acids 963 to 1043 (81 residues), 76.4 bits, see alignment 3.4e-25 amino acids 1047 to 1124 (78 residues), 86.2 bits, see alignment 3.2e-28 amino acids 1133 to 1215 (83 residues), 89.5 bits, see alignment 2.9e-29 amino acids 1219 to 1300 (82 residues), 90 bits, see alignment 2e-29 amino acids 1309 to 1390 (82 residues), 72.7 bits, see alignment 5.1e-24 amino acids 1394 to 1476 (83 residues), 84.4 bits, see alignment 1.1e-27 amino acids 1482 to 1549 (68 residues), 65.4 bits, see alignment (E = 9.4e-22) PF13585: CHU_C" amino acids 1568 to 1649 (82 residues), 86.8 bits, see alignment 1.7e-28 TIGR04131: gliding motility-associated C-terminal domain" amino acids 1568 to 1651 (84 residues), 53 bits, see alignment 3e-18

Best Hits

Predicted SEED Role

"internalin, putative" in subsystem Listeria surface proteins: Internalin-like proteins

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1X9YVN0 at UniProt or InterPro

Protein Sequence (1651 amino acids)

>CA264_16725 hypothetical protein (Pontibacter actiniarum KMM 6156, DSM 19842)
MRSWLEKVILLLVCFCMMSVVASAQQAPALGAVYEFGAVASSKITNTGNTVVHASIGVAN
GAIQGFPPGEYRRGYYQGGQLAKQAIADARVAYDFMAGQANTGTIASNNLTGSTITPGVY
TINGDASLNGKLTLNGLSQRNPVFIIKVTGNLTLTKGEYELLNNAAGINLFWVVEGNVQV
AQGAAALGNVFARGNIVMQDGAQLQGRLIAREGEIQLSNNVLNHPADLEIILSKTPGSKG
PDTYAFGETISYTIKVRNNGPTNEEGVVVTGIQFSGEMQSYTSSRPGTSFSGSAWAVGSL
AYQEEVALTIVARVNQAGAGYLRGLVYGIGIDEVRQNNTGDLSFCVLLSETGVINGPAEV
CLGDSFEYSIADVDGATRYTWSVPSGWSFVPLGPATRSTTIRVTVGGSNPNPERSGFIKV
TASNTCGEGPARALGVTMQADVPPQPGPITGPDAICRGTASATYSIVPVANASSYSWAVP
EGWAIETGQGTTEISVIPGATGGTVSVMAINACGSSVPQTLQVRVDDATPEMPTEIIGTP
QGCVGTVMPFEVAEEPTAKTYNWEVTGDGWSIVSGNGTRKVMVRIGSAAGDITVRLENGC
GVSEPVAKHVEPVSSPSPAPGQITGEAYTCSNQTGLEYFVEPVPTATYYYWTVPEGWDIV
EGQGTVKIVVDASAEGGDITVVAINDCGTSDKSSLRIIAAEGVPVAPGPITGKMYGCANS
NATYSIAEETDAASYVWSVPADWTIISGQGTTSIEVTTGAMSGKVTVAVVNGCGTGAVSA
LDVQPQITPPAPPTSIVGPSEVCQDGVNYEYRVNPVASESGYTWTVPADWVITSGQGTSR
ITVTAGAMEGAVTVAALNDCGEGGAASMPVTVVPSPPDQPGAITGPPSACVNQRNVTYSI
EPVAGASSYLWSVGDKDWQIVSGQGSTSIVVNAGTEPTTISVRAVNACGVTSETQLATVV
TDTVPATPDPITGNLYPCAGKVHTFSIDPVQHAFKYNWSVPEGWQVLEDNGTSITVETDG
TAGTVSVTAENGCGPGFARTLQVTPVTAVAAAPEAILGNIDVCAGDEVTFSVKEVAGASG
YNWVVPAGWQIISGQGTASILVKVNATAGDVTVTSLNDCGDGGTISRNIPVNTAAPTTPE
SIVGSPQVCSSTTVVYSIDPVSTASSYTWSVPGDWEILSGQGTTSIEAKIGKAVGNVTVV
AVNSCGGSGDAELAVEVAQGAPLAPGAIKVPAGSFCQGTTGLEYSVDPIAGANGYSWTVP
AGWVITDGQGTTRITVTAGAVGGEVTVTATNSCGDGGTAKAETRAQTFPLVPEITIGSFT
PCQSENTTYSVTANTVGNVDTYLWEVPKGWTIVSGQNTNTLEVIADGTAGKIKVTAKNSC
GDSGTAEMEVRPTPAAPVEPGAIVGEAGVCVGGTVTYTIENPTADATYNWNVPAGWSITT
GQGTATITVVAGSEAGTITVTGQNGCGSTSPASLKVGVMPAEGATAIIDRSTPCVGLSYE
VEPVPGATTYTWAVPAGWSITSGQGTPKITVEPGAGKGDISVVVGNGGCVDEPLYITPSA
IMAKSDLNFPNVFSPNNDGTHDTWKIKNLENYPDNEVTIINRWGNQVYHGKSYQGNWTGD
NLSEGTYFYVVRVKLCDGEDKMFKGYVMIVR