Protein Info for CA264_16515 in Pontibacter actiniarum KMM 6156, DSM 19842

Annotation: histidine kinase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 750 800 850 882 transmembrane" amino acids 12 to 31 (20 residues), see Phobius details amino acids 314 to 335 (22 residues), see Phobius details PF05227: CHASE3" amino acids 52 to 170 (119 residues), 50.3 bits, see alignment E=4.8e-17 PF00512: HisKA" amino acids 361 to 426 (66 residues), 73.1 bits, see alignment 3e-24 PF02518: HATPase_c" amino acids 473 to 588 (116 residues), 104.1 bits, see alignment E=1.2e-33 PF00072: Response_reg" amino acids 613 to 722 (110 residues), 88.9 bits, see alignment E=5.1e-29

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1X9YVI4 at UniProt or InterPro

Protein Sequence (882 amino acids)

>CA264_16515 histidine kinase (Pontibacter actiniarum KMM 6156, DSM 19842)
MKISGDSIKTKVVAGFTLALSVVLVAIYLTYTSFTKLLNSVEVLSQPNTKLMELQHTLST
ISTAESAIRAYTLTTKESHFKAYLSHLDTIRNQIDSLECLMEDSPRELAQVDSISALLSE
KQKSLELYVALKKRQKLNNYSGKAMRQIASTAEEKPLSTTIHQQTTTTISDNLNMNGTDE
PQQKEEQPQQEKEDKRGFFGKLFSKKEKQEKETPPPPKVIVPQLDVRQEIRIDTSIAATP
VAPLSKVRRILHNVQREADAQEQQLQAKELALLQQDKQIMDQIRTMMYQLERHEQEQAAL
NSSRARDVAEETSVIMLLIGIVGLGSGIAFILMILRDLTRSNNYKSRLIQAQKEAVKLAR
AKEAFVANMSHEMRTPLNVILGFTQQMRHAPLQPQQQEHLQAINGAGQHLLHIVNDVLDL
SKIEAGKLQIDRTVFSLHRLLTEVEQAFALKASSKSVTFSCKADPAIPDGLCGDALRLKQ
VLFNLADNAIKFTHQGQVQVEVSLRSRRRNRAVLSIAVADTGIGIPQERIQHVFGEFNQA
DDSILRKYGGTGLGLSISKKLVEMQGGTLAVNSVYGEGTTFTIVLPMQVAQEQVPAAPPE
PLAVPATFRGFKVLVVDDDAYSRTLCDLILSRWGMKVYLANDGQEALDLVQQHSFDVVLT
DIQLPGMSGKTVARNIRRLDKQVPIIALTANILSNDTDFFKNSAITAHVMKPFTEQELHE
KLAEALPISPIDVQEEEQHVPAGTLRLPAAAVAQTPEAPLYDLSEMRLFTGDDHQALADV
LEVLVEDQEQNLKQLEQTAAAQDWEANANMAHKMLTAFKHLKAHTVTPYLLQLEQVLHTG
EAEQSVLEQAVAEALPQVQKVLGALRQELQSVRATAEQQPVE