Protein Info for CA264_16325 in Pontibacter actiniarum KMM 6156, DSM 19842

Annotation: ATP synthase F0 subunit A

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 338 signal peptide" amino acids 1 to 23 (23 residues), see Phobius details transmembrane" amino acids 116 to 135 (20 residues), see Phobius details amino acids 175 to 195 (21 residues), see Phobius details amino acids 201 to 222 (22 residues), see Phobius details amino acids 233 to 254 (22 residues), see Phobius details amino acids 264 to 285 (22 residues), see Phobius details amino acids 295 to 324 (30 residues), see Phobius details TIGR01131: ATP synthase F0, A subunit" amino acids 112 to 325 (214 residues), 154.5 bits, see alignment E=2.1e-49 PF00119: ATP-synt_A" amino acids 118 to 324 (207 residues), 213.3 bits, see alignment E=2.1e-67

Best Hits

KEGG orthology group: K02108, F-type H+-transporting ATPase subunit a [EC: 3.6.3.14] (inferred from 61% identity to chu:CHU_0179)

Predicted SEED Role

"ATP synthase F0 sector subunit a"

KEGG Metabolic Maps

Isozymes

Compare fitness of predicted isozymes for: 3.6.3.14

Use Curated BLAST to search for 3.6.3.14

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1X9YVK0 at UniProt or InterPro

Protein Sequence (338 amino acids)

>CA264_16325 ATP synthase F0 subunit A (Pontibacter actiniarum KMM 6156, DSM 19842)
MKRLFVLLFSLLTLTASAKAPAEGEVFQPGEMITHHIADDYIWEFAEGAVLYLPVILVDN
GELKVFSSGNFYDEFHERQPYNGYAMEHGHIVRVDEAGEPVEDHAALYDFSITKNVASMF
ISVALLLIIFFVIAGRYKNNPKSAPSGIQSFFEPIIIFIRDEIAKANIGPKYERYMPYLL
TVFFFIWFNNLLGLMPGGANLTGNIAVTLVLALITLLITVFSGNKSYWKHIFATPGVPTW
LAPIMIPVELIGILTKPFSLMVRLFANITAGHIIILSLFSLIFIFRSVAVGPLSVAFATF
MNFLELFVALLQAYIFTLLSAMYFGGAVEEHDHAEDHH