Protein Info for CA264_16120 in Pontibacter actiniarum KMM 6156, DSM 19842

Annotation: sensor histidine kinase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 349 transmembrane" amino acids 7 to 28 (22 residues), see Phobius details amino acids 40 to 60 (21 residues), see Phobius details amino acids 67 to 88 (22 residues), see Phobius details amino acids 108 to 131 (24 residues), see Phobius details PF06580: His_kinase" amino acids 151 to 230 (80 residues), 96.6 bits, see alignment E=8.4e-32

Best Hits

Predicted SEED Role

"Autolysin sensor kinase (EC 2.7.3.-)" (EC 2.7.3.-)

Isozymes

Compare fitness of predicted isozymes for: 2.7.3.-

Use Curated BLAST to search for 2.7.3.-

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1X9YVN8 at UniProt or InterPro

Protein Sequence (349 amino acids)

>CA264_16120 sensor histidine kinase (Pontibacter actiniarum KMM 6156, DSM 19842)
MSQVRVIMIYLAWALLWAVVQTALLWSVGFSARVAVSDALLTNLLLTVGGYAMGTGLRYY
QPNIREAAHLVGWSLGLAVLSTMVFYWVTTRAFRGDVVYLDFVDATLAVRFLFTWLMVLL
LLLLSWFWFYTLERQQDEQRRAAAEKLAREAELHTLRQQLQPHFLFNSLNSISALVGAKP
EQARKMIQQLSDFLRGTLRKDNQQQVSLTDELQHLELYLEIEKVRFGHRLQTAIEVQNET
MNMHLPALLLQPVVENAIKFGLYDTIGDTVISIKATAQDHHLLLQVQNPYDPATARPQQG
TGFGLSSVQRRLYLLYARQDLLQTRQEENQFITTIQIPQKNDEVPDHRR