Protein Info for CA264_15770 in Pontibacter actiniarum KMM 6156, DSM 19842

Annotation: FAD-dependent oxidoreductase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 371 signal peptide" amino acids 1 to 25 (25 residues), see Phobius details PF12831: FAD_oxidored" amino acids 4 to 144 (141 residues), 30.1 bits, see alignment E=1.8e-10 PF01266: DAO" amino acids 4 to 35 (32 residues), 30.3 bits, see alignment (E = 1.8e-10) PF01494: FAD_binding_3" amino acids 4 to 302 (299 residues), 60.1 bits, see alignment E=1.2e-19 PF00890: FAD_binding_2" amino acids 4 to 35 (32 residues), 32.8 bits, see alignment (E = 2.5e-11) PF01134: GIDA" amino acids 4 to 35 (32 residues), 23.8 bits, see alignment (E = 1.2e-08) PF05834: Lycopene_cycl" amino acids 4 to 152 (149 residues), 27.4 bits, see alignment E=1e-09 PF00070: Pyr_redox" amino acids 5 to 61 (57 residues), 30.6 bits, see alignment E=2.2e-10 PF13450: NAD_binding_8" amino acids 7 to 38 (32 residues), 25 bits, see alignment (E = 1e-08)

Best Hits

KEGG orthology group: None (inferred from 50% identity to psn:Pedsa_1775)

Predicted SEED Role

"Probable alkylhalidase homolog (EC 3.8.1.1)" (EC 3.8.1.1)

Isozymes

No predicted isozymes

Use Curated BLAST to search for 3.8.1.1

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1X9YV19 at UniProt or InterPro

Protein Sequence (371 amino acids)

>CA264_15770 FAD-dependent oxidoreductase (Pontibacter actiniarum KMM 6156, DSM 19842)
MTKDVLVIGGGLAGLVSALGLARAGLAVTLVEKKAYPFHRVCGEYVSNEVLPYLRKLGAE
ISTLGPARINHFRLTSPTGSALQAKLDLGGFGVSRYTLDNYLYELAQRQGVQFMLQQTVQ
EVAFADDRFTARLSGGQRLQARVAVGAFGKRANLDRQLQRSFFRSRSPYIGVKYHVRHDA
PRNEIALHNFKDGYAGTSAVEDDRYCLCYLTTRENLKKHGSVAAMEKAVLYRNPHLRQVF
EQAEFLYSQPEVINEISFATKTCVEDHMLMCGDAAGMITPLCGNGMAMAIHSAKILTNHV
QHYFSNGQNRAELEAGYTHAWKKQFENRLRLGRTVQGLFGSPVLSEMAVGALKHLPWAVQ
LIMRQTHGRPF