Protein Info for CA264_15560 in Pontibacter actiniarum KMM 6156, DSM 19842

Annotation: CPBP family intramembrane metalloprotease

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 244 transmembrane" amino acids 12 to 30 (19 residues), see Phobius details amino acids 50 to 69 (20 residues), see Phobius details amino acids 81 to 99 (19 residues), see Phobius details amino acids 111 to 127 (17 residues), see Phobius details amino acids 143 to 162 (20 residues), see Phobius details amino acids 171 to 190 (20 residues), see Phobius details amino acids 203 to 228 (26 residues), see Phobius details PF02517: Rce1-like" amino acids 112 to 205 (94 residues), 40.1 bits, see alignment E=1.8e-14

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1X9YV45 at UniProt or InterPro

Protein Sequence (244 amino acids)

>CA264_15560 CPBP family intramembrane metalloprotease (Pontibacter actiniarum KMM 6156, DSM 19842)
MKALEDVKSVKWKAIAAFYAAACGLTYLFLQLPNLVANFSIRLFGFDPPFNWNHGLALFT
ASLLAYRLFQLPKQTTLLGTKPLKSILFSAVFLIAYTAIGIRNKYGVEEHLWAFIFCSAT
LVYDVLEESAWRGFLNDAFRPSSFWLKAVVTGIMWSFWHLLVFDSFAPWGGFHYFVVLSV
IASVLIGYATERTNAVLVAASVHALLILKDMHVTVACLAIWLVLLLTWSNTKYKVPKLFS
QTGQ