Protein Info for CA264_15535 in Pontibacter actiniarum KMM 6156, DSM 19842

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 724 signal peptide" amino acids 1 to 40 (40 residues), see Phobius details transmembrane" amino acids 329 to 348 (20 residues), see Phobius details amino acids 359 to 379 (21 residues), see Phobius details amino acids 401 to 422 (22 residues), see Phobius details amino acids 430 to 455 (26 residues), see Phobius details amino acids 459 to 488 (30 residues), see Phobius details amino acids 500 to 518 (19 residues), see Phobius details PF04389: Peptidase_M28" amino acids 106 to 294 (189 residues), 145.7 bits, see alignment E=1.5e-46 PF01546: Peptidase_M20" amino acids 124 to 186 (63 residues), 28.3 bits, see alignment E=1.6e-10

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1X9YV14 at UniProt or InterPro

Protein Sequence (724 amino acids)

>CA264_15535 hypothetical protein (Pontibacter actiniarum KMM 6156, DSM 19842)
MQYRNGAVAAFILLALTGLAFLSLYLLSPPAPVPATAPAAAFSAERAMQHVRQIAQEPHA
MGTAAHAEVRGYLLRQMQALGLEPQVQEATVVNNRSGIATVGHVYNLVGRLKGTGAGGKA
VLLVAHYDSQPNARGAGDDGAGVAAILETVRALKQAEPLAHDVVVLLSDGEEYGLYGAKA
FLGHPWANEVGLVLNLEARGNTGPSMTFELSPQNGWVARQYVQEAPYPFVSSLAYEIYRR
MPNDTDFTVFKDAGYSGLNSAFIDGFVHYHRSTDSPENLNAGSLQQHGSNLLALARHFGN
TSLSQTKAPDIVFFNLAGSWVVSYPKSLNILWVSLTSLLLLVTLVVGVQKQATSLRQVII
GFFVYLLMLAAVTALFIPVNNLVVGLMPTLRPAQGVHGVDMFFVAYLLLALGLFLLLTWL
ALRWLRLFSLLMGVFILCYALLLALVPAIFIMFPIVQVVFVAFGLSLPLGMVALLLLLAG
LLLPLLVLVEQSFSWGRVPLLPLLLLLLGTAAVAFAIHREDPTPERPLRSHVSYFLNADT
GQAVWASAYTTADEWNRQFFPASSVSPLKEVYPHARIVYLKNEAEQLNLAAPLAEVLQDT
VAGNERVLRLRLRSQRQAAHLELVLRPTPAEALQSAAVGGKALDLEPIETDRGEVYFARL
HGLPGSKAVELELRLTPGAPVELLLYDQSIGLPQQLVKQPRPSHVIAEHGRDSNLTVVRK
RYTF