Protein Info for CA264_14590 in Pontibacter actiniarum KMM 6156, DSM 19842
Annotation: phosphoribosylformylglycinamidine synthase I
These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.
Protein Families and Features
Best Hits
Swiss-Prot: 55% identical to PURQ_ANAVT: Phosphoribosylformylglycinamidine synthase subunit PurQ (purQ) from Anabaena variabilis (strain ATCC 29413 / PCC 7937)
KEGG orthology group: K01952, phosphoribosylformylglycinamidine synthase [EC: 6.3.5.3] (inferred from 68% identity to sli:Slin_6348)MetaCyc: 52% identical to phosphoribosylformylglycinamidine synthetase subunit I (Bacillus subtilis subtilis 168)
Phosphoribosylformylglycinamidine synthase. [EC: 6.3.5.3]
Predicted SEED Role
"Phosphoribosylformylglycinamidine synthase, glutamine amidotransferase subunit (EC 6.3.5.3)" in subsystem De Novo Purine Biosynthesis (EC 6.3.5.3)
MetaCyc Pathways
- superpathway of histidine, purine, and pyrimidine biosynthesis (42/46 steps found)
- superpathway of purine nucleotides de novo biosynthesis I (21/21 steps found)
- superpathway of purine nucleotides de novo biosynthesis II (23/26 steps found)
- 5-aminoimidazole ribonucleotide biosynthesis I (5/5 steps found)
- superpathway of 5-aminoimidazole ribonucleotide biosynthesis (5/6 steps found)
- 5-aminoimidazole ribonucleotide biosynthesis II (4/5 steps found)
KEGG Metabolic Maps
Isozymes
Compare fitness of predicted isozymes for: 6.3.5.3
Use Curated BLAST to search for 6.3.5.3
Sequence Analysis Tools
PaperBLAST (search for papers about homologs of this protein)
Search CDD (the Conserved Domains Database, which includes COG and superfam)
Predict protein localization: PSORTb (Gram-negative bacteria)
Predict transmembrane helices and signal peptides: Phobius
Check the current SEED with FIGfam search
Find homologs in fast.genomics or the ENIGMA genome browser
See A0A1X9YUJ0 at UniProt or InterPro
Protein Sequence (230 amino acids)
>CA264_14590 phosphoribosylformylglycinamidine synthase I (Pontibacter actiniarum KMM 6156, DSM 19842) MKFGVVVFPGSNCDQDLVDAISVGMGQECIKLWHKDHDLQGCDFILLPGGFSYGDYLRSG AISRFSPIMQEVVQHANKGGYVMGICNGFQILTEAGLLPGALLRNANQKFICDNVYIKPA TTNLLPTRLLDMDKAYKIPVAHGEGRYHADKETLKRLEDNEQIMFKYSSNVADTHEIYNI NGSLLNIAGVSNEQKNVFGMMPHPERAVDPELGNTDGRAIFESILNLVNA