Protein Info for CA264_14550 in Pontibacter actiniarum KMM 6156, DSM 19842

Annotation: cell surface protein SprA

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 200 400 600 800 1000 1200 1400 1600 1800 2000 2200 2375 TIGR04189: cell surface protein SprA" amino acids 67 to 2375 (2309 residues), 2455.8 bits, see alignment E=0 PF14349: SprA_N" amino acids 81 to 365 (285 residues), 62 bits, see alignment E=2.9e-21 amino acids 1092 to 1587 (496 residues), 526.9 bits, see alignment E=3.4e-162

Best Hits

Predicted SEED Role

"FIG00648977: hypothetical protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1X9YY60 at UniProt or InterPro

Protein Sequence (2375 amino acids)

>CA264_14550 cell surface protein SprA (Pontibacter actiniarum KMM 6156, DSM 19842)
MLAWWSQAEELRTSRRSKLTILQNLLSLQDTLRQDTAKYIPSRRPTFTPSDRYGSPFGTR
SSTSPLLLGQPNNVQLNVELDDSLQQYNITETLGDSVMYRPPSSMSMREYSEWQQREAIR
NYWRAKSAGLDGESVVSSNRLIPKIYISPVFDRIFGGNYVDIQPNGNVGLKFGARFNRNE
NPTIPLSQQRTGDFDFEQNISLNLVGKIGEKMRLNFNWDNNANFDFENNMKLDYTGYEEE
IIRKVEAGNVSLPLNNSLITGAQNLFGVKAQLQFGRLGVTTIASSVRGTNDEVIIQNGGQ
NKPFEIRVDRYDRDRHFFLSQFFRGRYNQALRSLPLVNSGIVIRRVELYVTNNNRSTENL
RNIVAYMDLGEADPYRDRFDTSRPATAPADNQANALYSLISPKDSKARNNSAVDGYLQSL
GLEKGIDFEHVRARKLEPNEYKFNPQLGYISLNSALLPDQVLGIAFEYTYNGKTYQVGEL
IDDYQNLDSEKVIHMKLLRATNPSLNYPTWDLMMKNVYALDATQVNREDFKLQIVYKDDE
SGVDLTSIKEPSPIQNIPLVEVLNLDNVNSNNDKPSDGNFDFLPGITIDTESGRIFFPQV
EPFGDYLASKLEGYPNLVDQYVFQELYEQTQTDAQQNNVKAKFYIKGRLQSTSSDEIMLP
GFQIAEGSVVVYSGGTRLVEGTDYQVFYDLGRIKILNPSYLSSANDLRVTYEKAELLNIQ
PRTMLGARFDYRLNDDVNIGATVLHLSEQSYINRVSIGDEPTNNTMYGLDLNMQKESRML
TRFVDAIPLIQTKAPSLVTFSGEFAQLVPTKSKSNANEDGASYLDDFEGAETPYSLGGFN
NSTWRLAATPAPLVPGAGLAYSYNRAKFAWYTIDQIFYRNADNLKPDNITDEELKNNYVR
GVYRTEIFPGRDSEVSNTYEYTFDLAYYPRERGQYNYNYNLTQEGLLAGDPRNNWGGISR
EISFDTDFDNANIEYMEFWLMDPFIAGPNGRDGAFGGNVNPRDPGQLVLNLGNVSEDILD
DNEYAFENGLPTGANDVQDLEETIWGRITQQQFLTDAFTGIPGGRKFQDIGLDGLNDASE
TTFFQDPFLSRIPGAVPQTVLDDPSADNFLHHLDPVYDQRNAGVLQRYKNYNGMENNSPE
NSRFANYAFPDKEDLNGDNVINDLEQYYEYKINLNPDQLNVGQNYIVDKVEGRNGATWYQ
FRVPVRQPTGTVGNIDGFKSVRFMRLYMTGFADPVVLRMAQFQFVANQWRKFEQPLTEGT
PCLTCTDDARSFTVSTVNIEENSQVVEGVNTIPYQVPPGIERLRDYSSTNERRQNEQSLQ
LCVEDLKDSFSKAVFKNISLDLLAYKQLKMFIHAQSDEPSIQDGEMQAFIRIGTDFTQNY
YEYVVPLKFTQAGAISANEIWPNENEVNVNLQELVDAKVKRNTAAPGNIYVPYTVTTADG
KLIRVVGNPDFSEVEGIMIGIRNPSDRNSDARPHSACIWVDELRVTDFVNKSGWASTARM
NAKLADFANITATGAYTTVGFGGLQQQLSLRSREDISQFDVTANVVLDKFLPEQWGVKVP
LTVQYGVTSAEPQYDPLDKDVPLEQSLSKFDNDEARDAYKKEVITQETRRSISLLNVRKE
RTDPEAKARIYDIENFAVSYSYAERLYTDVETDRDYTKTYTGALAYTYTNTPRSYQPFAD
SEKLNSPYLRLIKDFNFSLLPSTFSFRADLSRFYNETYLQRPDPETRFVTTRGIEPVFQK
NFFFNRIYDMRWDLTKSLSLDYTATNRSVIDEPDGRINNEVDSLAYKNKRIWENLREGGR
NTNFNQLVALNYKLPLDKFPLTDWISADTRYAATYIWTAGSTALNQDTTFRLGNTAENNM
EFSMNGRIDMVKLYNKVKFLKEVNSPTPAKPANLIPNDTSATEKKKPDLKFVKSLARVLM
MTRSLNMTYQENRGTLLPGYLPDTKFFGFDDAFDAPGLPFILGKQYELSELYDRANSNGW
YTDSSQYLNTPFSAVHTETFTGRANLEPFRNFNVTLDVRRTKSEIEEVFYRKEFDDFGDV
SQEDQRQNPFTSGAFSTSFMALGTLFESTDDGVSAAFEEFIRNRHVIRDRLTAANPAAGD
SGYTLNSQEVLLKSFLYAYQGREVNGYEAKAESPFSRLPIPNWSITYNGLERLPIFQTWF
SQISISHAYSSSYNITSYTTSLAYNQEPSGFPTQLNEFGQIEPYYIVNQLTVMERLAPLL
GINFRTKNNLTGRLEYKMERNLSLNLTNAQITETNVKDYVVGFGYSTNHFRLPFKIGGER
ITLDNELTMRLDLQVRDNQTVQRAISDDGTGNERSQNQITNGTRQLQLRPTIDYVLSQRL
NLQFYVLRTVSDPKISTSFRNSVTEGGIQLRVSLQ