Protein Info for CA264_14325 in Pontibacter actiniarum KMM 6156, DSM 19842
Annotation: superoxide dismutase
These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.
Protein Families and Features
Best Hits
Swiss-Prot: 71% identical to SODM_BACSU: Superoxide dismutase [Mn] (sodA) from Bacillus subtilis (strain 168)
KEGG orthology group: K04564, superoxide dismutase, Fe-Mn family [EC: 1.15.1.1] (inferred from 78% identity to fbc:FB2170_06535)MetaCyc: 55% identical to superoxide dismutase (Mn) (Escherichia coli K-12 substr. MG1655)
Superoxide dismutase. [EC: 1.15.1.1]
Predicted SEED Role
"Manganese superoxide dismutase (EC 1.15.1.1)" in subsystem Nitric oxide synthase or Oxidative stress (EC 1.15.1.1)
MetaCyc Pathways
- reactive oxygen species degradation (4/4 steps found)
- ethene biosynthesis III (microbes) (6/7 steps found)
- superoxide radicals degradation (2/2 steps found)
Isozymes
No predicted isozymesUse Curated BLAST to search for 1.15.1.1
Sequence Analysis Tools
PaperBLAST (search for papers about homologs of this protein)
Search CDD (the Conserved Domains Database, which includes COG and superfam)
Compare to protein structures
Predict protein localization: PSORTb (Gram-negative bacteria)
Predict transmembrane helices and signal peptides: Phobius
Check the current SEED with FIGfam search
Find homologs in fast.genomics or the ENIGMA genome browser
See A0A1X9YUJ5 at UniProt or InterPro
Protein Sequence (202 amino acids)
>CA264_14325 superoxide dismutase (Pontibacter actiniarum KMM 6156, DSM 19842) MAFELPKLPYAYDALEPHIDARTMEIHHTKHHQAYTTNLNNAIQGTELEGKSIEEIMRSV KEDNKAVRNNGGGYYNHNLFWTILSPNGGGQPSGELADAINSAFGSFDQFKEKFNAAAAT RFGSGWAWLCVKDGKLEICSTPNQDNNLMPFAEGCGGQPILGLDVWEHAYYLNYQNRRPD YINAFWNVVNWEEVTRRYNEAK