Protein Info for CA264_13940 in Pontibacter actiniarum KMM 6156, DSM 19842

Annotation: glycosyl hydrolase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 750 800 850 900 950 985 signal peptide" amino acids 1 to 44 (44 residues), see Phobius details PF15979: Glyco_hydro_115" amino acids 213 to 545 (333 residues), 532.1 bits, see alignment E=7.2e-164 PF17829: GH115_C" amino acids 805 to 973 (169 residues), 222.2 bits, see alignment E=4.2e-70

Best Hits

KEGG orthology group: None (inferred from 54% identity to ote:Oter_4344)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1X9YUA3 at UniProt or InterPro

Protein Sequence (985 amino acids)

>CA264_13940 glycosyl hydrolase (Pontibacter actiniarum KMM 6156, DSM 19842)
MKYSLLATTCKTQKRARRLPWAKHVYALLLVFGFVLMPQLTQAAANGDTYISSTNSKGSF
ALAASGKAAPLYVSSEDFAGVVRAAKDLQADVNRVTKVQPNLTIDKKAPKAKQVVLIGTL
GKSPVIDKLVKSKKLDVSGIAGKWETYLVQVVDKPMRGVDQALVIAGSDKRGTIFGIYDV
SAQIGVSPWYYWADVPVKQQQNLYVTPGRHTDGEPKVKYRGIFINDEAPALAGWATEKFG
GFNSKFYANVFELVLRLKGNYLWPAMWGRAFYDDDPKNPELANEYGVVIGTSHHEPLSRA
HDEWRRFGTGKWNYQTNKENLQKFWRDGIARMGKNESIVTIGMRGDGDEPMSEDSNIALL
EQIVDDQRKIIADVTGKPASETPQIWALYKEVQDYYDKGMRVPDDVTLLLADDNWGNLRK
LPKAGAKQHAGGFGVYYHFDYVGGPRNYKWINTNPLPRIWEQMHLAYEHNANKIWIVNVG
DIKPMEFPTSFFLDYAWNPEKWPAERLDEYTKQWAAQQFPQQYATEIAELLAKYGKYNSR
RKPELLSPETYSLTNYREAESVVAEYLQLAEKAEQLYKKMPQDYKDAYFQLVLHPVKASA
NLNALYLAVAKNRLYAKQGRAAANSYATKAKELFDVDQELSRIYNEDIANGKWSHMMDQT
HISYTYWQQPDKDVLPEVKEITLPAGSEMGVAIEGSENWWPNAKGEAVLPELTPFGQQSY
YIEIFNRGQKPFTYTVQTGAEWLQVDQKQGAVNDQQRLFVSVNWKQAPKGKQRVPVTITG
PNGKRVVVQAVVNNPANLTADNVKGFVESNGYVAMNAENFSRTIEAGDAQWKVIPDLGRT
ASAVAPFPVTAKSKKPGSDSPRLEYDMYLLNSGEVNVKLLVSPTLNYNESDGLRYAVAID
DAAPQIVNIHKDNTTQSWDEWVGNNIIVTQSKHKVEKPGQHVLKVWMVDPGVVLQKIVVE
TDGAKPSYLGPPESGRPETATSAVK