Protein Info for CA264_13395 in Pontibacter actiniarum KMM 6156, DSM 19842

Annotation: aminopeptidase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 304 PF05343: Peptidase_M42" amino acids 116 to 296 (181 residues), 84.8 bits, see alignment E=5.6e-28 PF01546: Peptidase_M20" amino acids 167 to 301 (135 residues), 29.2 bits, see alignment E=8.4e-11

Best Hits

KEGG orthology group: None (inferred from 60% identity to mtt:Ftrac_1936)

Predicted SEED Role

"Cellulase M and related proteins"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1X9YU01 at UniProt or InterPro

Protein Sequence (304 amino acids)

>CA264_13395 aminopeptidase (Pontibacter actiniarum KMM 6156, DSM 19842)
MKLLEKLCKIHAPSGNEQNLSNFLVNYIEEQKVHWKQPPLVLCGEGFQDCVLLVFGKPRS
AIFAHMDSIGFTVRYGNQLVRIGGPDLETGYKLVGKDSQGEIECTLEFDEDTHALTYAYE
REIERGTELVFKCDFRETEESVQSCYLDNRLGIWSALQVAETMENGIIAFSCWEEHGGGS
VAYLAKYIYEQYRVKQGLISDITWVTEGVQAGNGVVISMRDSLIPRRAYVERIIGIAKEA
GVPYQLEVEGSGGSDAKELQHSAYPWDWCFVGAPEDNVHTPNEIVHKKDIESMVALYKVL
MDKL