Protein Info for CA264_12730 in Pontibacter actiniarum KMM 6156, DSM 19842

Annotation: sodium:solute symporter

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 492 transmembrane" amino acids 6 to 23 (18 residues), see Phobius details amino acids 43 to 66 (24 residues), see Phobius details amino acids 74 to 96 (23 residues), see Phobius details amino acids 119 to 145 (27 residues), see Phobius details amino acids 151 to 170 (20 residues), see Phobius details amino acids 180 to 200 (21 residues), see Phobius details amino acids 232 to 250 (19 residues), see Phobius details amino acids 271 to 295 (25 residues), see Phobius details amino acids 316 to 337 (22 residues), see Phobius details amino acids 368 to 389 (22 residues), see Phobius details amino acids 396 to 416 (21 residues), see Phobius details amino acids 428 to 446 (19 residues), see Phobius details amino acids 454 to 475 (22 residues), see Phobius details PF00474: SSF" amino acids 33 to 423 (391 residues), 92.5 bits, see alignment E=1.4e-30

Best Hits

KEGG orthology group: None (inferred from 64% identity to sli:Slin_1598)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1X9YTI8 at UniProt or InterPro

Protein Sequence (492 amino acids)

>CA264_12730 sodium:solute symporter (Pontibacter actiniarum KMM 6156, DSM 19842)
MSPTLIIGLIVAYFCILIFISYLTSRNTDSETFFLANRSSPWYVVAFGMIGTSLSGVTFV
SIPGMVAVSQFSYLQFVLGYLLGYFVIATVLMPLYYRMNLVSIYTYLEQRFGYWSYKTGA
GFFLLARTLGAAIRLFLVAGVLQLAVFDEMGVPFSVSVIITIALIWVYTFRGGMKTIIWT
DTFQTTAMLVAVGVSIWLISDELNLGFQGMIDTIKASDYSQIFYWDFKDSKYFLKQFFSG
AFIAIVMTGLDQDMMQKNLSCKNLGEAQKNMFWFSIILVFVNILFLALGALLYVYAQAKG
IALPERGDDVFPFLALNHFTYFAGIVFILGIIAITYASADSALTALTTSFCVDFLDFKKR
SEQQRVRLRYIVHAGFSLVMVLVIIAFDILNDDNVVTAVFKVAGYTYGPLLGLYSFGIYT
KRAVRDKFVPAVCIIAPLLTLIVSYNSVDWFWGYEFGFEVLILNGFLTFVGLMAVSSGKV
NELELAQEQQTA