Protein Info for CA264_12710 in Pontibacter actiniarum KMM 6156, DSM 19842

Annotation: SAM-dependent methyltransferase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 225 transmembrane" amino acids 134 to 153 (20 residues), see Phobius details amino acids 163 to 181 (19 residues), see Phobius details PF13489: Methyltransf_23" amino acids 35 to 157 (123 residues), 29.9 bits, see alignment E=8.6e-11 PF13649: Methyltransf_25" amino acids 45 to 144 (100 residues), 43 bits, see alignment E=1.3e-14 PF08242: Methyltransf_12" amino acids 46 to 144 (99 residues), 41.4 bits, see alignment E=3.9e-14 PF08241: Methyltransf_11" amino acids 47 to 140 (94 residues), 26.7 bits, see alignment E=1.4e-09

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1X9YTM1 at UniProt or InterPro

Protein Sequence (225 amino acids)

>CA264_12710 SAM-dependent methyltransferase (Pontibacter actiniarum KMM 6156, DSM 19842)
MPQLPDSGFTRVASFYDALARLVYGSALEQAQGALLPFLPRQARVLVIGGGSGWLLEQLL
VTGKQLEILYLDAAPAMLERAQKRYRAFGQAHACRVSFRLGTEQALQPQEQFDVIFTPFL
LDLFPPLRLRRLMSRLSAALAYQGLWLFADFWPVRQPPPWWQRQLARSMYLFFGLISGIK
AKQFPSYGRHFSALGFQEKYSRAFFRGMVQAKVLQRPMPSVPECA