Protein Info for CA264_12455 in Pontibacter actiniarum KMM 6156, DSM 19842

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 209 TIGR03570: sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family" amino acids 3 to 204 (202 residues), 214.4 bits, see alignment E=6.2e-68 PF17836: PglD_N" amino acids 3 to 82 (80 residues), 47.4 bits, see alignment E=3.4e-16 PF00132: Hexapep" amino acids 156 to 189 (34 residues), 37.1 bits, see alignment 2.6e-13 PF14602: Hexapep_2" amino acids 157 to 189 (33 residues), 39.5 bits, see alignment 5.5e-14

Best Hits

Predicted SEED Role

"4-amino-6-deoxy-N-Acetyl-D-hexosaminyl-(Lipid carrier) acetyltrasferase" in subsystem N-linked Glycosylation in Bacteria

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1X9YTH9 at UniProt or InterPro

Protein Sequence (209 amino acids)

>CA264_12455 hypothetical protein (Pontibacter actiniarum KMM 6156, DSM 19842)
MQRIVLIGYSGHAFVVADTVEMLGGEIVGYCDKVEAKRNPYSLVYLGDEQDATTVSKLTA
LEARFIVSIGNNSARRNLTKQLTEQGIHSISVIHPSAFISKLSTVGQGSFVSAGAIVNPM
ASIGMGAIINTSAVVEHECLVGDYAHIAPGAVLAGNVSIGEGSFIGANAVVKQGTSIGKN
VVIGAGAVVVKDVPDNLILVGNPAVELKK