Protein Info for CA264_12270 in Pontibacter actiniarum KMM 6156, DSM 19842

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 349 transmembrane" amino acids 27 to 47 (21 residues), see Phobius details amino acids 67 to 85 (19 residues), see Phobius details amino acids 106 to 125 (20 residues), see Phobius details amino acids 145 to 163 (19 residues), see Phobius details amino acids 174 to 193 (20 residues), see Phobius details amino acids 199 to 219 (21 residues), see Phobius details amino acids 228 to 246 (19 residues), see Phobius details amino acids 252 to 269 (18 residues), see Phobius details amino acids 281 to 301 (21 residues), see Phobius details amino acids 320 to 339 (20 residues), see Phobius details PF01757: Acyl_transf_3" amino acids 22 to 336 (315 residues), 135.6 bits, see alignment E=1.1e-43

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1X9YTG3 at UniProt or InterPro

Protein Sequence (349 amino acids)

>CA264_12270 hypothetical protein (Pontibacter actiniarum KMM 6156, DSM 19842)
MKQPSPMPIPETLPKAGIAERNHSLDVLRTLAMLLVILLHVAAPYASDGLEDRAFGTGFW
AGNVLNSFARVSVPVFVLISGSFLLGRREAYATFYLNRASRILWPFVFWVGAYSLYALYC
SYALTGRWAVAPVAVKALTGKPFYHLWYLYMLLGLYLVTPVISRAIAGLALREVSMAACF
LLLCGFTINLWNFYVGSGFIVLLWFTEYLGYYLMGYVLARSVAKYSQVLLLLVYVLLSLL
TALFVYATRSMYFYEFLSPLVLVASLALFKMFSQLRFGPNLLARLAKLTLGIYVVHAGVL
EAFQRLGQKYALSTGTALLDIPLRFCLVLLVSVLLVQAVSRVPGLKRVV