Protein Info for CA264_12125 in Pontibacter actiniarum KMM 6156, DSM 19842

Annotation: glycosyl transferase family 1

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 356 PF13439: Glyco_transf_4" amino acids 6 to 172 (167 residues), 49.8 bits, see alignment E=8.2e-17 PF13579: Glyco_trans_4_4" amino acids 7 to 172 (166 residues), 39.2 bits, see alignment E=1.9e-13 PF00534: Glycos_transf_1" amino acids 180 to 328 (149 residues), 73.1 bits, see alignment E=4.2e-24 PF13692: Glyco_trans_1_4" amino acids 185 to 315 (131 residues), 64.2 bits, see alignment E=3.2e-21

Best Hits

KEGG orthology group: None (inferred from 53% identity to geo:Geob_3244)

Predicted SEED Role

"Glycosyltransferase"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1X9YTC6 at UniProt or InterPro

Protein Sequence (356 amino acids)

>CA264_12125 glycosyl transferase family 1 (Pontibacter actiniarum KMM 6156, DSM 19842)
MTADTVGGVWNYSLELVQALAPFKTQVALATMGAPLTEEQRRQAGEIDNLTIYESNYKLE
WMENPWEDVEKAGEWLLKLKDEVQPDLVHLNGLVHGSLDFGVPTLAVVHSCVLSWWKAVK
EEEAPQEWDKYKEMVTKGLQSADVVVAPTQAMLHQAEQLYGPFKSSVVVYNGRGQHFYQF
GKKEPFVFSMGRVWDEAKNISTLAHIASDLQWPVYIAGDAKHPATGKEVELENVHFLGQL
PEKEVQDWLSRASVYALPAKYEPFGLTVLEAAMSGCALVVGKAESQAEIWGNAAKYVNPN
DADELRDTINSLIEDEFARNIMAMRAIKRSHGYTADPMGQDYDHIYRQMLKQAVAV